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Amino-11-ddUTP
| Catalog Number | R11-0001 |
| Category | DNA Stains |
| Molecular Formula | C18H62Li3N4O32P3 |
| Molecular Weight | 960.44 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Amino-11-ddUTP is a terminator triphosphate for enzymatic end-labeling of DNA. The nucleotide is incorporated by Taq DNA polymerase, Sequenase, Klenow fragment. Subsequent reaction of amino-terminated DNA with activated esters can be used for the end-labeling of DNA.
Chemical Information
Product Specification
Computed Properties
| Purity | NMR 1H and 31P, HPLC-MS (99+%) |
| IUPAC Name | [[[5-[5-[3-(4-aminobutanoylamino)prop-1-ynyl]-2,4-dioxopyrimidin-1-yl]oxolan-2-yl]methoxy-oxidophosphoryl]oxy-oxidophosphoryl] hydrogen phosphate |
| Canonical SMILES | C1CC(OC1COP(=O)([O-])OP(=O)([O-])OP(=O)(O)[O-])N2C=C(C(=O)NC2=O)C#CCNC(=O)CCCN |
| InChI | InChI=1S/C16H25N4O14P3/c17-7-1-4-13(21)18-8-2-3-11-9-20(16(23)19-15(11)22)14-6-5-12(32-14)10-31-36(27,28)34-37(29,30)33-35(24,25)26/h9,12,14H,1,4-8,10,17H2,(H,18,21)(H,27,28)(H,29,30)(H,19,22,23)(H2,24,25,26)/p-3 |
| InChIKey | ROYWJKOFQAFJCX-UHFFFAOYSA-K |
| Solubility | good in water |
| Appearance | colorless solid |
| Storage | 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
| XLogP3 | -7.8 |
| Hydrogen Bond Donor Count | 4 |
| Hydrogen Bond Acceptor Count | 15 |
| Rotatable Bond Count | 13 |
| Exact Mass | 587.03453738 g/mol |
| Monoisotopic Mass | 587.03453738 g/mol |
| Topological Polar Surface Area | 282Ų |
| Heavy Atom Count | 37 |
| Formal Charge | -3 |
| Complexity | 1120 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 2 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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