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Sulfo-Cyanine5 dUTP
| Catelog Number | R11-0004 |
| Category | DNA Stains |
| Molecular Formula | C49H66N6Li4O22P3S2 |
| Molecular Weight | 1275.89 |
| Catalog Number | Size | Price | Quantity |
|---|---|---|---|
| R11-0004 | -- | $-- |
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Product Introduction
Sulfo-Cyanine5 dUTP (deoxyuridine triphosphate) is a modified nucleoside triphosphate for the enzymatic labeling of DNA. The triphosphate is an analog of Cy5-dUTP. However, unlike aminoallyl dUTP directly modified with dye, this triphosphate contains a longer linker arm that increases the efficiency of its incorporation by usual polymerases, like Taq polymerase.Sulfo-Cyanine5 is a bright far red emitting dye for Cy5 channel.
Chemical Information |
|
|---|---|
| Purity | HPLC-MS (95%), testing in enzymatic reaction |
| IUPAC Name | tetralithium;1-[6-[[6-[3-[1-[(2R,4S,5R)-4-hydroxy-5-[[[[hydroxy(oxido)phosphoryl]oxy-oxidophosphoryl]oxy-oxidophosphoryl]oxymethyl]oxolan-2-yl]-2,4-dioxopyrimidin-5-yl]prop-2-ynylamino]-6-oxohexyl]amino]-6-oxohexyl]-3,3-dimethyl-2-[5-(1,3,3-trimethyl-5-sulfonatoindol-1-ium-2-yl)penta-2,4-dienylidene]indole-5-sulfonate |
| Canonical SMILES | [Li+].[Li+].[Li+].[Li+].CC1(C2=C(C=CC(=C2)S(=O)(=O)[O-])[N+](=C1C=CC=CC=C3C(C4=C(N3CCCCCC(=O)NCCCCCC(=O)NCC#CC5=CN(C(=O)NC5=O)C6CC(C(O6)COP(=O)([O-])OP(=O)([O-])OP(=O)(O)[O-])O)C=CC(=C4)S(=O)(=O)[O-])(C)C)C)C |
| InChI | InChI=1S/C50H65N6O22P3S2.4Li/c1-49(2)36-28-34(82(69,70)71)21-23-38(36)54(5)42(49)17-9-6-10-18-43-50(3,4)37-29-35(83(72,73)74)22-24-39(37)55(43)27-14-8-12-20-44(58)51-25-13-7-11-19-45(59)52-26-15-16-33-31-56(48(61)53-47(33)60)46-30-40(57)41(76-46)32-75-80(65,66)78-81(67,68)77-79(62,63)64;;;;/h6,9-10,17-18,21-24,28-29,31,40-41,46,57H,7-8,11-14,19-20,25-27,30,32H2,1-5H3,(H8-,51,52,53,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74);;;;/q;4*+1/p-4/t40-,41+,46+;;;;/m0..../s1 |
| InChI Key | XUOUVZOCIBKQEC-WBXYKXSUSA-J |
| Solubility | good in water |
| Appearance | blue solid / solution |
Product Specification |
|
|---|---|
| ε, L⋅mol-1⋅cm-1 | 271000 |
| Fluorescence Quantum Yield | 0.28 |
| Excitation | 646 |
| Emission | 662 |
| Storage | 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
Computed Properties | |
|---|---|
| Hydrogen Bond Donor Count | 5 |
| Hydrogen Bond Acceptor Count | 23 |
| Rotatable Bond Count | 25 |
| Exact Mass | 1282.3133347 g/mol |
| Monoisotopic Mass | 1282.3133347 g/mol |
| Topological Polar Surface Area | 443Ų |
| Heavy Atom Count | 87 |
| Formal Charge | 0 |
| Complexity | 3020 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 3 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 3 |
| Covalently-Bonded Unit Count | 5 |
| Compound Is Canonicalized | Yes |
Applications of Fluorescent Probes & Dyes
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