6-R6G cyclohexyl Phosphoramidite

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6-R6G cyclohexyl Phosphoramidite

6-R6G cyclohexyl Phosphoramidite

Catalog Number R10-0029
Category DNA Stains
Molecular Formula C46H52F6N5O8P
Molecular Weight 947.91
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Product Introduction

6-R6G cyclohexyl Phosphoramidite is a fluorescent labeling reagent used in oligonucleotide synthesis. It contains a 6-carboxyrhodamine 6G (6-R6G) fluorophore attached to a cyclohexyl phosphoramidite moiety, enabling incorporation of the R6G label at the 5' end of DNA or RNA sequences during automated solid-phase synthesis. It is commonly used in multiplex PCR, DNA sequencing, fragment analysis, and fluorescence resonance energy transfer (FRET) applications.

  • Chemical Information

Chemical Information

Synonyms 6-R6G Phosphoramidite; R6G cyclohexyl Phosphoramidite, 6-isomer; 4-(3',6'-Bis(N-ethyl-2,2,2-trifluoroacetamido)-2',7'-dimethyl-3-oxo-3H-spiro[isobenzofuran-1,9'-xanthene]-6-carboxamido)cyclohexyl (2-cyanoethyl) diisopropylphosphoramidite; 6-R6G Phosphoramidite ACH
SMILES N#CCCOP(N(C(C)C)C(C)C)OC(CC1)CCC1NC(C2=CC3=C(C(OC43C(C=C5C)=C(OC(C=C6N(C(C(F)(F)F)=O)CC)=C4C=C6C)C=C5N(C(C(F)(F)F)=O)CC)=O)C=C2)=O
InChI InChI=1S/C46H52F6N5O8P/c1-9-55(42(60)45(47,48)49)36-23-38-34(20-27(36)7)44(35-21-28(8)37(24-39(35)63-38)56(10-2)43(61)46(50,51)52)33-22-29(12-17-32(33)41(59)64-44)40(58)54-30-13-15-31(16-14-30)65-66(62-19-11-18-53)57(25(3)4)26(5)6/h12,17,20-26,30-31H,9-11,13-16,19H2,1-8H3,(H,54,58)
InChIKey BUKZOVIUGRKPCD-UHFFFAOYSA-N

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