Long trebler phosphoramidite

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Long trebler phosphoramidite

Long trebler phosphoramidite | 1516489-83-0

Catelog Number R10-0009
Category DNA Stains
Molecular Formula C89H107N2O15P
Molecular Weight 1475.78
Catalog Number Size Price Quantity
R10-0009 -- $--

Product Introduction

Long trebler phosphoramidite is a branching reagent for oligonucleotide synthesis allowing to synthesize branched DNA structures using a standard DNA synthesizer.After the condensation of the trebler, three DNA branches begin to grow simultaneously with each step of the synthesis. Deblock of this construct gives rise to DNA containing a branching point. One arm (stem) is attached to the branch point with its 5'-end, and other arms (branches) are attached with their 3'-ends. Reverse amidites can be used to prepare constructs with different branch orientations. Repetitive condensations of trebler results in formation of DNA dendrimers.

Chemical Information

Purity NMR 1H, 31P, HPLC-MS (95%)
IUPAC Name 3-[3-[3-[3-[bis(4-methoxyphenyl)-phenylmethoxy]propoxy]-2,2-bis[3-[bis(4-methoxyphenyl)-phenylmethoxy]propoxymethyl]propoxy]propoxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile
Canonical SMILES CC(C)N(C(C)C)P(OCCCOCC(COCCCOC(C1=CC=CC=C1)(C2=CC=C(C=C2)OC)C3=CC=C(C=C3)OC)(COCCCOC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC)COCCCOC(C7=CC=CC=C7)(C8=CC=C(C=C8)OC)C9=CC=C(C=C9)OC)OCCC#N
InChI InChI=1S/C89H107N2O15P/c1-69(2)91(70(3)4)107(105-63-20-55-90)106-64-24-59-101-68-86(65-98-56-21-60-102-87(71-25-14-11-15-26-71,74-31-43-80(92-5)44-32-74)75-33-45-81(93-6)46-34-75,66-99-57-22-61-103-88(72-27-16-12-17-28-72,76-35-47-82(94-7)48-36-76)77-37-49-83(95-8)50-38-77)67-100-58-23-62-104-89(73-29-18-13-19-30-73,78-39-51-84(96-9)52-40-78)79-41-53-85(97-10)54-42-79/h11-19,25-54,69-70H,20-24,56-68H2,1-10H3
InChI Key GLIQPXBAWPTSHZ-UHFFFAOYSA-N
Solubility soluble in acetonitrile, dichloromethane
Appearance viscous yellowish oil

Product Specification

Storage 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 2 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

XLogP3 15.9
Hydrogen Bond Donor Count 0
Hydrogen Bond Acceptor Count 17
Rotatable Bond Count 49
Exact Mass 1474.74090771 g/mol
Monoisotopic Mass 1474.74090771 g/mol
Topological Polar Surface Area 166Ų
Heavy Atom Count 107
Formal Charge 0
Complexity 2050
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 1
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 1
Compound Is Canonicalized Yes

Patents

Publication NumberTitlePriority Date
US-2021155926-A1 siRNAs WITH AT LEAST TWO LIGANDS AT DIFFERENT ENDS 2018-04-05
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