Iowa Black RQ Pro Phosphoramidite

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Iowa Black RQ Pro Phosphoramidite

Iowa Black RQ Pro Phosphoramidite

Catalog Number R10-0037
Category Other Quencher
Molecular Formula C64H73N6O10P
Molecular Weight 1117.29
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* Please be kindly noted products are not for therapeutic use. We do not sell to patients.

Product Introduction

Iowa Black RQ Pro Phosphoramidite is a dark quencher reagent used in oligonucleotide synthesis. It contains an Iowa Black RQ non-fluorescent chromophore attached to a hydroxyprolinol-based phosphoramidite moiety. The hydroxyprolinol linker provides a rigid, non-nucleosidic scaffold for efficient incorporation of the Iowa Black RQ quencher at the 5' end of DNA or RNA sequences during automated solid-phase synthesis. It efficiently quenches fluorescence in the 500-700 nm range via Förster resonance energy transfer (FRET), making it ideal for dual-labeled probe synthesis such as TaqMan probes, molecular beacons, and other real-time PCR applications.

  • Chemical Information

Chemical Information

Synonyms 2-((9,10-Dioxo-4-(phenylamino)-9,10-dihydroanthracen-1-yl)amino)ethyl (6-((2S,4R)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-(((2-cyanoethoxy)(diisopropylamino)phosphaneyl)oxy)pyrrolidin-1-yl)-6-oxohexyl)carbamate; Iowa Black RQ Phosphoramidite (hydroxyprolinol)
SMILES COC1=CC=C(C(C2=CC=CC=C2)(OC[C@@H]3C[C@H](CN3C(CCCCCNC(OCCNC(C(C(C4=C5C=CC=C4)=O)=C6C5=O)=CC=C6NC7=CC=CC=C7)=O)=O)OP(OCCC#N)N(C(C)C)C(C)C)C(C=C8)=CC=C8OC)C=C1
InChI InChI=1S/C64H73N6O10P/c1-44(2)70(45(3)4)81(79-39-18-36-65)80-53-41-50(43-78-64(46-19-10-7-11-20-46,47-26-30-51(75-5)31-27-47)48-28-32-52(76-6)33-29-48)69(42-53)58(71)25-14-9-17-37-67-63(74)77-40-38-66-56-34-35-57(68-49-21-12-8-13-22-49)60-59(56)61(72)54-23-15-16-24-55(54)62(60)73/h7-8,10-13,15-16,19-24,26-35,44-45,50,53,66,68H,9,14,17-18,25,37-43H2,1-6H3,(H,67,74)/t50-,53+,81?/m0/s1
InChIKey SIGTYCYKBKERGZ-OPIRNBENSA-N

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