Cy5-PEG3-azide

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Cy5-PEG3-azide

Cy5-PEG3-azide

Catelog Number A17-0154
Category Cyanine5
Molecular Formula C40H55ClN6O4
Molecular Weight 719.4
Catalog Number Size Price Quantity
A17-0154 -- $--

Product Introduction

Cy5-PEG3-Azide is a Cy5 labeled near infrared fluorescent (NIR) PEG linker dye containing an azide group, which enables Click Chemistry. The hydrophilic PEG spacer increases solubility in aqueous media. This reagent can be used to label alkyne-bearing molecules or biomolecules with Cy5 dye.

Chemical Information

Purity 96%
IUPAC Name N-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethyl]-6-[(2E)-3,3-dimethyl-2-[(2E,4E)-5-(1,3,3-trimethylindol-1-ium-2-yl)penta-2,4-dienylidene]indol-1-yl]hexanamide;chloride
Canonical SMILES CC1(C2=CC=CC=C2[N+](=C1C=CC=CC=C3C(C4=CC=CC=C4N3CCCCCC(=O)NCCOCCOCCOCCN=[N+]=[N-])(C)C)C)C.[Cl-]
InChI InChI=1S/C40H54N6O4.ClH/c1-39(2)32-16-11-13-18-34(32)45(5)36(39)20-8-6-9-21-37-40(3,4)33-17-12-14-19-35(33)46(37)25-15-7-10-22-38(47)42-23-26-48-28-30-50-31-29-49-27-24-43-44-41;/h6,8-9,11-14,16-21H,7,10,15,22-31H2,1-5H3;1H
InChI Key IPFARVGHBHWPPX-UHFFFAOYSA-N
Solubility DMSO, DMF, DCM, low solubility in water

Product Specification

Excitation 646
Emission 662
Storage -20 °C

Computed Properties

Hydrogen Bond Donor Count 1
Hydrogen Bond Acceptor Count 8
Rotatable Bond Count 21
Exact Mass 718.3973320 g/mol
Monoisotopic Mass 718.3973320 g/mol
Topological Polar Surface Area 77.4Ų
Heavy Atom Count 51
Formal Charge 0
Complexity 1250
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 3
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 2
Compound Is Canonicalized Yes
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