![{[Name]}](https://resource.bocsci.com/structure/2107273-44-7.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/cyanine-5-cpg.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/1267804-34-1.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/146368-15-2.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/1807529-70-9.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/351186-76-0.gif?v=2025011501)
Inquiry Basket
N-(m-PEG9)-N'-(propargyl-PEG9)-Cy5
| Catalog Number | A17-0158 |
| Category | Cyanine5 |
| Molecular Formula | C65H103ClN2O18 |
| Molecular Weight | 1236.0 |
| Catalog Number | Size | Price | Quantity |
|---|---|---|---|
| A17-0158 | -- | -- |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
N-(m-PEG9)-N'-(propargyl-PEG8)-Cy5 is a cyanine linker with excitation/emmission maximum 649/667 nm containing an alkyne group, which enables Click Chemistry to attach deeply colored and photostable Cyanine fluorophore to various molecules.
Chemical Information
Product Specification
Application
Computed Properties
| Purity | 97% |
| IUPAC Name | (2E)-2-[(2E,4E)-5-[3,3-dimethyl-1-[2-[2-[2-[2-[2-[2-[2-[2-(2-prop-2-ynoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]indol-1-ium-2-yl]penta-2,4-dienylidene]-1-[2-[2-[2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-3,3-dimethylindole;chloride |
| Canonical SMILES | CC1(C2=CC=CC=C2[N+](=C1C=CC=CC=C3C(C4=CC=CC=C4N3CCOCCOCCOCCOCCOCCOCCOCCOCCOC)(C)C)CCOCCOCCOCCOCCOCCOCCOCCOCCOCC#C)C.[Cl-] |
| InChI | InChI=1S/C65H103N2O18.ClH/c1-7-23-69-28-31-73-36-39-77-44-47-81-52-55-85-57-54-83-49-46-79-41-38-75-33-30-71-25-22-67-61-18-14-12-16-59(61)65(4,5)63(67)20-10-8-9-19-62-64(2,3)58-15-11-13-17-60(58)66(62)21-24-70-29-32-74-37-40-78-45-48-82-53-56-84-51-50-80-43-42-76-35-34-72-27-26-68-6;/h1,8-20H,21-57H2,2-6H3;1H/q+1;/p-1 |
| InChIKey | JZVAYHBQJGOEPM-UHFFFAOYSA-M |
| Solubility | Water, DMSO, DMF, DCM |
| Excitation | 649 |
| Emission | 667 |
| Storage | -20 °C |
N-(m-PEG9)-N’-(propargyl-PEG9)-Cy5, a bichromophoric compound renowned for its fluorescence properties, finds extensive utility in various biochemical applications. Here are four key applications of N-(m-PEG9)-N’-(propargyl-PEG9)-Cy5:
Fluorescence Imaging: Positioned at the forefront of fluorescence microscopy and imaging technologies, N-(m-PEG9)-N’-(propargyl-PEG9)-Cy5 serves as a beacon for visualizing dynamic biological processes in real-time. Its robust fluorescence illuminates specific cellular structures, proteins, or nucleic acids, facilitating intricate imaging studies. This compound plays a pivotal role in both live-cell imaging and fixed-cell staining protocols.
Protein Labeling: In the realm of biochemical exploration, N-(m-PEG9)-N’-(propargyl-PEG9)-Cy5 emerges as a versatile tool for protein labeling, enabling a myriad of analytical applications. The propargyl group’s incorporation allows for bioorthogonal labeling via click chemistry, turning it into a dynamic asset for studying protein dynamics, interactions, and localization.
Flow Cytometry: Harnessing the vibrant fluorescence of N-(m-PEG9)-N’-(propargyl-PEG9)-Cy5, flow cytometry delves into the realm of cell analysis and sorting with unprecedented precision. By leveraging the compound’s intense fluorescence, researchers can dissect cell populations based on specific biomarker expressions, enhancing the resolution and sensitivity of cellular analyses. This application assumes critical importance in fields such as immunology, cancer research, and stem cell investigations.
| Hydrogen Bond Donor Count | 0 |
| Hydrogen Bond Acceptor Count | 20 |
| Rotatable Bond Count | 58 |
| Exact Mass | 1234.6894421 g/mol |
| Monoisotopic Mass | 1234.6894421 g/mol |
| Topological Polar Surface Area | 172Ų |
| Heavy Atom Count | 86 |
| Formal Charge | 0 |
| Complexity | 1790 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 3 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 2 |
| Compound Is Canonicalized | Yes |
Recommended Services
Recommended Articles
- Hoechst Dyes: Definition, Structure, Mechanism and Applications
- Mastering the Spectrum: A Comprehensive Guide to Cy3 and Cy5 Dyes
- Fluorescent Probes: Definition, Structure, Types and Application
- Fluorescent Dyes: Definition, Mechanism, Types and Application
- Coumarin Dyes: Definition, Structure, Benefits, Synthesis and Uses
- BODIPY Dyes: Definition, Structure, Synthesis and Uses
- Cyanine Dyes: Definition, Structure, Types and Uses
- Fluorescein Dyes: Definition, Structure, Synthesis and Uses
- Rhodamine Dyes: Definition, Structure, Uses, Excitation and Emission
- Unlocking the Power of Fluorescence Imaging: A Comprehensive Guide
- Cell Imaging: Definitions, Systems, Protocols, Dyes, and Applications
- Lipid Staining: Definition, Principles, Methods, Dyes, and Uses
- Flow Cytometry: Definition, Principles, Protocols, Dyes, and Uses
- Nucleic Acid Staining: Definition, Principles, Dyes, Procedures, and Uses
- DNA Staining: Definition, Procedures, Benefits, Dyes and Uses
- Cell Staining: Definition, Principles, Protocols, Dyes, and Uses
- Ion Imaging: Definition, Principles, Benefits, Dyes, and Uses
- Fluorescent Labeling: Definition, Principles, Types and Applications
Recommended Products
Online Inquiry
