
Biotin-PEG2-azide | CAS 945633-30-7
| Catalog Number | R14-0003 |
| Category | Azides |
| Molecular Formula | C₁₆H₂₈N₆O₄S |
| Molecular Weight | 400.50 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Biotin-PEG2-CH2CH2N3 is a polyethylene glycol (PEG)-based PROTAC linker. Biotin-PEG2-CH2CH2N3 can be used in the synthesis of a series of PROTACs.
Chemical Information
Product Specification
Application
Computed Properties
Patents
Chemical Information
| Synonyms | Biotin-PEG3-Azide;(+)-Biotin-PEG2-CH2CH2N3; Biotin-PEG2-CH2CH2N3 |
| Purity | >97% |
| IUPAC Name | 5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]-N-[2-[2-(2-azidoethoxy)ethoxy]ethyl]pentanamide |
| SMILES | C1C2C(C(S1)CCCCC(=O)NCCOCCOCCN=[N+]=[N-])NC(=O)N2 |
| InChI | InChI=1S/C16H28N6O4S/c17-22-19-6-8-26-10-9-25-7-5-18-14(23)4-2-1-3-13-15-12(11-27-13)20-16(24)21-15/h12-13,15H,1-11H2,(H,18,23)(H2,20,21,24)/t12-,13-,15-/m0/s1 |
| InChIKey | OVEZMVONEJMGLZ-YDHLFZDLSA-N |
| Solubility | Soluble in DMF, DMSO, moderately Soluble in water |
| Appearance | White Solid |
Product Specification
| Storage | Powder, -20°C, 3 years; 4°C, 2 years; In solvent, -80°C, 6 months; -20°C, 1 month |
Application
Biotin-PEG2-azide is a biotin-functionalized azide building block designed for copper-free and copper-assisted azide–alkyne click chemistry workflows. The reagent combines a biotin affinity handle with a short PEG2 linker, improving aqueous compatibility and reducing steric constraints during labeling and conjugation. As a result, Biotin-PEG2-azide is widely used to introduce a robust capture tag into biomolecules, polymers, and surfaces for downstream pull-down, detection, and material characterization.
1. Affinity Pull-Down Assays
Biotin-PEG2-azide is commonly used to incorporate a biotin capture handle into proteins, peptides, and other biomolecular targets that will be analyzed by streptavidin- or NeutrAvidin-based pull-down workflows. Researchers use it to generate clickable biotinylated probes that can be enriched from complex mixtures, enabling sensitive detection by immunoblotting, mass spectrometry sample preparation, or activity-based profiling formats. The PEG2 spacer helps maintain accessibility of the biotin moiety after conjugation, which is particularly valuable when labeling bulky proteins or densely functionalized samples.
2. Surface And Material Functionalization
Biotin-PEG2-azide supports the creation of biotin-functional coatings and interfaces by click-compatible coupling to alkyne-presenting surfaces, linkers, or polymer films. Materials scientists and assay developers use the reagent to spatially pattern or uniformly decorate substrates so that subsequent streptavidin binding can be used for immobilizing enzymes, affinity reagents, or capture antibodies. The water-soluble PEG2 linker improves practical handling during surface modification steps and helps preserve biotin accessibility for reliable downstream binding in microarrays, biosensor platforms, and affinity-based material assays.
3. Imaging And Detection Probes
Biotin-PEG2-azide is frequently incorporated into molecular imaging and analytical detection strategies where biotin serves as a universal labeling handle compatible with streptavidin conjugates. In research settings, it is used to create clickable biotinylated reporters that can be coupled to fluorophore-, enzyme-, or tag-bearing streptavidin reagents for visualization and readout. The azide functionality enables modular probe assembly with alkyne partners, while the PEG2 spacer supports consistent labeling in aqueous buffers commonly used for microscopy, flow-based assays, and analytical chemistry workflows.
4. Diagnostic Reagent Development
Biotin-PEG2-azide is a practical reagent for constructing affinity reagents used in diagnostic-relevant assay development, including sample capture reagents and multivalent binding constructs. Teams developing immunoassay components or nucleic-acid/biomolecule workflows often rely on clickable biotin handles to standardize conjugation chemistry and streamline reagent assembly. By providing a biotin tag with improved accessibility via PEG2, Biotin-PEG2-azide helps downstream streptavidin-mediated immobilization and signal generation strategies remain robust across different assay formats and labeling densities.
Computed Properties
| XLogP3 | 0.7 |
| Hydrogen Bond Donor Count | 3 |
| Hydrogen Bond Acceptor Count | 7 |
| Rotatable Bond Count | 14 |
| Exact Mass | 400.18927457 g/mol |
| Monoisotopic Mass | 400.18927457 g/mol |
| Topological Polar Surface Area | 128Ų |
| Heavy Atom Count | 27 |
| Formal Charge | 0 |
| Complexity | 531 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 3 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| WO-2022272307-A1 | Bifunctional folate receptor binding compounds | 2021-06-24 |
| WO-2022150721-A1 | Bifunctional folate receptor binding compounds | 2021-01-08 |
| CA-3068146-A1 | Heterochromatin gene repression inhibitors | 2017-06-30 |
| EP-3645006-A1 | Heterochromatin gene repression inhibitors | 2017-06-30 |
| KR-20200035029-A | Heterochromatin gene inhibition inhibitor | 2017-06-30 |
Recommended Services
Recommended Articles
- Hoechst Dyes: Definition, Structure, Mechanism and Applications
- Mastering the Spectrum: A Comprehensive Guide to Cy3 and Cy5 Dyes
- Fluorescent Probes: Definition, Structure, Types and Application
- Fluorescent Dyes: Definition, Mechanism, Types and Application
- Coumarin Dyes: Definition, Structure, Benefits, Synthesis and Uses
- Unlocking the Power of Fluorescence Imaging: A Comprehensive Guide
- Cell Imaging: Definitions, Systems, Protocols, Dyes, and Applications
- Lipid Staining: Definition, Principles, Methods, Dyes, and Uses
- Flow Cytometry: Definition, Principles, Protocols, Dyes, and Uses
- Nucleic Acid Staining: Definition, Principles, Dyes, Procedures, and Uses
Recommended Products
Online Inquiry