
Azido-PEG9-amine | CAS 1207714-69-9
| Catalog Number | R14-0262 |
| Category | Azides |
| Molecular Formula | C20H42N4O9 |
| Molecular Weight | 482.58 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Azido-PEG9-amine is a PEG-based PROTAC linker that can be used in the synthesis of PROTACs. It is also a non-cleavable 9 unit PEG ADC linker used in the synthesis of antibody-drug conjugates (ADCs).
Chemical Information
Product Specification
Application
Computed Properties
Patents
Chemical Information
| Synonyms | N3-PEG9-CH2CH2NH2; Azido-PEG9-NH2; N3-PEG9-NH2; 29-azido-3,6,9,12,15,18,21,24,27-nonaoxanonacosan-1-amine; 1-Amino-29-azido-3,6,9,12,15,18,21,24,27-nonaoxanonacosane |
| Purity | ≥95% |
| Shelf Life | 0-4°C for short term (days to weeks), or -20°C for long term (months). |
| IUPAC Name | 2-[2-[2-[2-[2-[2-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanamine |
| SMILES | C(COCCOCCOCCOCCOCCOCCOCCOCCOCCN=[N+]=[N-])N |
| InChI | InChI=1S/C20H42N4O9/c21-1-3-25-5-7-27-9-11-29-13-15-31-17-19-33-20-18-32-16-14-30-12-10-28-8-6-26-4-2-23-24-22/h1-21H2 |
| InChIKey | QECAUUOGHAUEDJ-UHFFFAOYSA-N |
| Solubility | Soluble in DCM, DMF, DMSO, Water |
| Appearance | Colorless Oily Matter |
| LogP | -3.23 |
Product Specification
| Storage | Store at 2-8°C |
Application
Azido-PEG9-amine is a PEG-based linker bearing a terminal azide for copper-free or copper-mediated azide–alkyne click chemistry and a primary amine at the other end for subsequent coupling or surface attachment. The flexible PEG spacer (nine ethylene glycol units) is commonly used to improve solubility, reduce nonspecific interactions, and provide spatial separation between the click handle and the functional payload. This reagent is widely used in chemical biology and biomaterials workflows to install azide functionality on probes, surfaces, and macromolecular constructs prior to conjugation to alkyne-bearing partners.
1. Protein And Peptide Conjugation
Azido-PEG9-amine is used as an azide-functional PEG linker to prepare protein and peptide conjugates for downstream click labeling with alkyne-tagged reagents such as fluorophores, affinity handles, or imaging moieties. The terminal amine enables straightforward incorporation into amine-reactive labeling strategies or coupling to activated carriers, while the azide provides a robust click handle for modular assembly under conditions compatible with sensitive biomolecules. In research settings, the PEG spacer helps maintain accessibility of the reactive azide and can improve conjugate behavior in aqueous buffers, supporting consistent labeling for analytical assays and probe development.
2. Surface Functionalization For Materials
Azido-PEG9-amine is employed to introduce azide groups onto material surfaces and polymeric scaffolds for subsequent click immobilization of alkyne-bearing ligands, coatings, or capture reagents. The amine functionality supports attachment to common surface chemistries and activated substrates, while the PEG chain provides a hydrated, flexible linker that can reduce steric hindrance and nonspecific adsorption. This approach is frequently used in biomaterials science to create clickable interfaces for biosensing platforms, cell-interaction studies, and modular material patterning where spatially controlled presentation of bioactive or analytical components is required.
3. Fluorophore And Imaging Probe Assembly
Azido-PEG9-amine is a practical building block for constructing fluorescent and molecular imaging probes via azide–alkyne click conjugation to alkyne-functional dyes or imaging reporters. The PEG spacer can enhance probe solubility and help preserve photophysical performance by reducing close-contact quenching and improving the effective distance between the dye and the conjugation site. Researchers use this reagent to generate modular probe libraries, enabling rapid exchange of the imaging reporter through click-compatible partners while keeping the azide-bearing precursor consistent across experiments.
4. Bioconjugation Building Block For Assays
Azido-PEG9-amine is used to generate azide-bearing conjugation intermediates for assay reagents, including affinity reagents, detection constructs, and labeling reagents that require modular attachment to alkyne-tagged components. The presence of both an amine and an azide makes it suitable for iterative build strategies, where the amine is used to connect to a carrier or scaffold and the azide is retained for later click installation of a signal or targeting element. This design supports scalable workflows in chemical biology and diagnostic reagent development, where consistent click handles and linker-controlled spacing are important for reproducible reagent performance in assay formats.
Computed Properties
| XLogP3 | -1.1 |
| Hydrogen Bond Donor Count | 1 |
| Hydrogen Bond Acceptor Count | 12 |
| Rotatable Bond Count | 29 |
| Exact Mass | 482.29517893 g/mol |
| Monoisotopic Mass | 482.29517893 g/mol |
| Topological Polar Surface Area | 123Ų |
| Heavy Atom Count | 33 |
| Formal Charge | 0 |
| Complexity | 419 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| WO-2020229982-A1 | Antibody drug conjugates | 2019-05-10 |
| US-2022409734-A1 | Antibody drug conjugates | 2019-05-10 |
| US-2005153371-A1 | Conjugated small molecules | 2004-01-07 |
| US-2010048890-A1 | Conjugated small molecules | 2004-01-07 |
Recommended Services
Recommended Articles
- Hoechst Dyes: Definition, Structure, Mechanism and Applications
- Mastering the Spectrum: A Comprehensive Guide to Cy3 and Cy5 Dyes
- Fluorescent Probes: Definition, Structure, Types and Application
- Fluorescent Dyes: Definition, Mechanism, Types and Application
- Coumarin Dyes: Definition, Structure, Benefits, Synthesis and Uses
- Unlocking the Power of Fluorescence Imaging: A Comprehensive Guide
- Cell Imaging: Definitions, Systems, Protocols, Dyes, and Applications
- Lipid Staining: Definition, Principles, Methods, Dyes, and Uses
- Flow Cytometry: Definition, Principles, Protocols, Dyes, and Uses
- Nucleic Acid Staining: Definition, Principles, Dyes, Procedures, and Uses
Recommended Products
Online Inquiry