
Fluorescein-PEG6-Amine
| Catalog Number | F04-0014 |
| Category | Fluorescein FAM |
| Molecular Formula | C35H43N3O11S |
| Molecular Weight | 713.8 |
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Product Introduction
Fluorescein-PEG6-Amine is a fluorescein dye with excitation/emmission maximum 494/517 nm containing a free amine group, which can be reactive with cabroxylic acid, activated NHS ester, carbonyl (ketone, aldehyde) etc. The hydophilic PEG spacer increases solubility in aqueous media and reduces steric hindrance during binding.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 98% |
| IUPAC Name | 1-[2-[2-[2-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-3-(3',6'-dihydroxy-3-oxospiro[2-benzofuran-1,9'-xanthene]-5-yl)thiourea |
| SMILES | C1=CC2=C(C=C1NC(=S)NCCOCCOCCOCCOCCOCCOCCN)C(=O)OC23C4=C(C=C(C=C4)O)OC5=C3C=CC(=C5)O |
| InChI | InChI=1S/C35H43N3O11S/c36-7-9-42-11-13-44-15-17-46-19-20-47-18-16-45-14-12-43-10-8-37-34(50)38-24-1-4-28-27(21-24)33(41)49-35(28)29-5-2-25(39)22-31(29)48-32-23-26(40)3-6-30(32)35/h1-6,21-23,39-40H,7-20,36H2,(H2,37,38,50) |
| InChIKey | DRTOXEJBNKKBSY-UHFFFAOYSA-N |
Product Specification
| Excitation | 494 |
| Emission | 517 |
| Storage | -20 °C |
Application
Fluorescein-PEG6-Amine is a fluorescein-based fluorescent dye equipped with a polyethylene glycol (PEG) spacer and a terminal primary amine, enabling convenient conjugation to biomolecules, surfaces, and polymeric materials while improving handling and reducing steric constraints. Its fluorescein emission is widely used in fluorescence labeling workflows, and the amine functionality supports straightforward coupling strategies for building fluorescent conjugates for imaging and assay development.
1. Fluorescent Protein Labeling
Fluorescein-PEG6-Amine is frequently used by researchers to generate fluorescent protein conjugates for microscopy and fluorescence-based assays, where the PEG spacer helps maintain labeling flexibility and reduces direct dye-protein steric interference. The terminal amine allows incorporation into labeling schemes that attach the dye to proteins, including workflows where amine-reactive coupling reagents are used to create stable dye-protein conjugates. Common end users include cell biology laboratories and core imaging facilities preparing fluorescently labeled antibodies, affinity reagents, or protein standards for localization studies and quantitative fluorescence readouts.
2. Biomolecule Conjugation Reagent
Fluorescein-PEG6-Amine serves as a practical dye building block for constructing fluorescent conjugates from amine-bearing biomolecules, peptides, and other research reagents used in chemical biology. The PEG6 linker is particularly useful when the dye must be separated from the recognition element to preserve binding performance or to improve labeling reproducibility in multicomponent constructs. In typical reagent-development workflows, teams use this dye to prepare labeled probes for binding assays, tracking experiments, and fluorescence quantification in plate-based formats, where the fluorescein signal provides a familiar excitation/emission profile for standard fluorescence instrumentation.
3. Surface And Polymer Functionalization
Fluorescein-PEG6-Amine is also applied in biomaterials and materials science to introduce fluorescent functionality onto surfaces and polymeric platforms, supporting studies that require spatially resolved fluorescence readouts. The primary amine enables coupling to activated surface chemistries or polymer functional groups used to immobilize dyes on coatings, hydrogels, and functional polymers used in assay development and imaging experiments. This makes it a common choice for groups engineering fluorescently traceable materials, such as labeled scaffolds for microscopy, fluorescent tags for material characterization, and research-grade substrates for monitoring binding or transport phenomena.
4. Fluorescence Imaging Standards
Fluorescein-PEG6-Amine is used by microscopy and flow cytometry method developers to prepare fluorescent standards and calibration materials that support consistent imaging and quantitative fluorescence comparisons across experiments. Because it is a defined fluorescein dye with a handle for conjugation or incorporation into reference materials, it can be integrated into experimental controls used to verify staining performance, normalize signal across runs, or validate instrument settings during fluorescence microscopy method development. Imaging teams and assay developers often rely on fluorescein-based references for routine workflow checks where compatibility with common fluorescence detection channels is required.
Computed Properties
| XLogP3 | 1.2 |
| Hydrogen Bond Donor Count | 5 |
| Hydrogen Bond Acceptor Count | 13 |
| Rotatable Bond Count | 21 |
| Exact Mass | 713.26183037 g/mol |
| Monoisotopic Mass | 713.26183037 g/mol |
| Topological Polar Surface Area | 214Ų |
| Heavy Atom Count | 50 |
| Formal Charge | 0 |
| Complexity | 1000 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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