
FAM amine, 5-isomer | CAS 138589-19-2
| Catalog Number | F04-0001 |
| Category | Fluorescein FAM |
| Molecular Formula | C27H27N2ClO6 |
| Molecular Weight | 510.97 |
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Product Introduction
FAM amine, 5-isomer is an exceptional fluorescent probe deployed within the realm of biomedicine. It finds applicability in unraveling intricate cellular functionalities and protein-protein interplays. Its adeptness in labeling peptides, proteins, and nucleic acids is well-established. By imparting exceptional sensitivity and negating background fluorescence, the FAM amine, 5-isomer stands as an optimal choice for cutting-edge methodologies encompassing immunohistochemistry, flow cytometry, and in situ hybridization.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Related CAS | 2183440-41-5 (hydrochloride) |
| Synonyms | 6-isomer FAM amine; Fluorescein (FAM) amine |
| Purity | NMR 1H, HPLC-MS (95%) |
| IUPAC Name | 6-[(3',6'-dihydroxy-3-oxospiro[2-benzofuran-1,9'-xanthene]-5-carbonyl)amino]hexylazanium;chloride |
| SMILES | C1=CC2=C(C=C1C(=O)NCCCCCC[NH3+])C(=O)OC23C4=C(C=C(C=C4)O)OC5=C3C=CC(=C5)O.[Cl-] |
| InChI | InChI=1S/C27H26N2O6.ClH/c28-11-3-1-2-4-12-29-25(32)16-5-8-20-19(13-16)26(33)35-27(20)21-9-6-17(30)14-23(21)34-24-15-18(31)7-10-22(24)27;/h5-10,13-15,30-31H,1-4,11-12,28H2,(H,29,32);1H |
| InChIKey | YMNCSJRUUHHNGI-UHFFFAOYSA-N |
| Solubility | good in methanol, DMSO, DMF |
| Appearance | yellow solid |
Product Specification
| ε, L⋅mol-1⋅cm-1 | 80000 |
| Fluorescence Quantum Yield | 0.93 |
| Excitation | 490 |
| Emission | 513 |
| Storage | 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
Application
FAM amine, 5-isomer is a fluorescein (FAM) derivative supplied as an amine-functionalized labeling building block for fluorescent conjugation workflows. As a reactive fluorophore, it is commonly used to introduce bright green fluorescence into biomolecules and imaging reagents, where amine-reactive coupling strategies enable attachment to proteins, peptides, and other amine-bearing targets. Its fluorescein emission is widely compatible with standard fluorescence microscopy and flow cytometry filter sets used for FITC/FAM-type dyes.
1. Protein Fluorescent Labeling
FAM amine, 5-isomer is frequently used by protein chemistry and antibody/affinity-reagent developers to create fluorescently labeled biomolecules for binding studies and fluorescence-based assays. Researchers typically incorporate the amine-functional fluorophore into labeling workflows where amine coupling chemistries generate stable, traceable conjugates for tracking protein localization, monitoring binding interactions, and visualizing biomolecular distributions in assay formats compatible with fluorescein detection.
2. Peptide And Biomolecule Conjugates
FAM amine, 5-isomer supports fluorescent tagging of peptides and other amine-containing biomolecules used in chemical biology and molecular imaging reagent development. In practice, teams use the fluorophore to prepare labeled ligands, probes, or standards for studying uptake, trafficking, and interaction patterns in fluorescence microscopy experiments, as well as for generating reference materials for assay development and method validation in fluorescence readouts.
3. Fluorescent Assay Reagent Development
FAM amine, 5-isomer is used to build fluorescence reporters and labeling reagents for assay development where fluorescein emission serves as the optical readout. Assay developers incorporate the dye into conjugates that can be tracked in endpoint or kinetic fluorescence formats, including workflows that require robust fluorescent labeling of biomolecular components such as capture reagents, detection reagents, or internal standards for fluorescence quantification.
4. Flow Cytometry Dye Conjugates
FAM amine, 5-isomer is commonly leveraged in flow cytometry workflows that require fluorescein-channel-compatible labeling of biomolecules. Researchers use it to generate fluorescent conjugates for staining and quantifying labeled targets in suspension, including experiments where amine-based coupling enables attachment of the fluorophore to proteins or other biomolecular binders used as staining reagents for cell-associated fluorescence readouts.
Computed Properties
| Hydrogen Bond Donor Count | 4 |
| Hydrogen Bond Acceptor Count | 7 |
| Rotatable Bond Count | 7 |
| Exact Mass | 510.1557643 g/mol |
| Monoisotopic Mass | 510.1557643 g/mol |
| Topological Polar Surface Area | 133Ų |
| Heavy Atom Count | 36 |
| Formal Charge | 0 |
| Complexity | 751 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 2 |
| Compound Is Canonicalized | Yes |
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