
Propargyl-PEG3-amine | CAS 932741-19-0
| Catalog Number | R01-0206 |
| Category | Alkynes |
| Molecular Formula | C₉H₁₇NO₃ |
| Molecular Weight | 187.24 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Propargyl-PEG3-amine is a polyethylene glycol (PEG)-based PROTAC linker. Propargyl-PEG3-amine can be used in the synthesis of a series of PROTACs.
Chemical Information
Product Specification
Application
Computed Properties
Patents
Chemical Information
| Synonyms | Alkyne-PEG3-amine;HC≡C-CH2-PEG3-NH2; Propyne-PEG3-NH2 |
| Purity | >97% |
| IUPAC Name | 2-[2-(2-prop-2-ynoxyethoxy)ethoxy]ethanamine |
| SMILES | C#CCOCCOCCOCCN |
| InChI | InChI=1S/C9H17NO3/c1-2-4-11-6-8-13-9-7-12-5-3-10/h1H,3-10H2 |
| InChIKey | MREICTHRFCQNJR-UHFFFAOYSA-N |
| Solubility | Water, DMSO, DCM, DMF |
| Density | 1.0±0.1 g/cm3 |
| Appearance | Colorless Liquid |
| Boiling Point | 267.4±25.0 °C at 760 mmHg |
Product Specification
| Storage | Please store the product under the recommended conditions in the Certificate of Analysis. |
| Signal | Danger |
| Precautionary Statement Codes | P260, P261, P264, P270, P271, P280, P301+P317, P301+P330+P331, P302+P361+P354, P304+P340, P305+P354+P338, P316, P319, P321, P330, P363, P403+P233, P405, and P501 |
Application
Propargyl-PEG3-amine is a PEG-based propargylated amine building block designed for copper-free or copper-catalyzed click chemistry workflows, most commonly used to introduce a terminal alkyne handle onto amine-bearing targets. Its flexible, hydrophilic PEG spacer improves solubility and reduces nonspecific interactions in labeling and conjugation formats, while the propargyl group enables efficient bioorthogonal coupling to azide-functional partners. As a versatile click-compatible linker, Propargyl-PEG3-amine is widely used in molecular imaging reagent construction, surface and material functionalization, and the preparation of PEGylated probes for analytical and cell-based assay development.
1. Bioorthogonal Surface Functionalization
Propargyl-PEG3-amine is used to functionalize polymeric and biomaterial surfaces with a terminal alkyne for subsequent azide-directed conjugation, enabling modular assembly of capture ligands, affinity tags, and imaging handles. The PEG3 spacer helps maintain surface wettability and reduces steric crowding, which is particularly valuable when immobilizing probes on hydrogels, biosensor coatings, and microfabricated substrates. Researchers commonly pair Propargyl-PEG3-amine with azide-bearing biomolecules or reporter constructs to generate reproducible, spatially defined functional surfaces for downstream binding, imaging, and analytical readouts.
2. Targeted Probe and Labeling Builds
Propargyl-PEG3-amine serves as a click-ready linker for preparing azide-reactive labeling reagents and probe scaffolds that require an alkyne-functional intermediate. The amine functionality supports straightforward incorporation into amine-reactive conjugation schemes or coupling to activated carriers, while the propargyl group provides the orthogonal click handle for attaching fluorophores, affinity moieties, or other reporter payloads via azide partners. In chemical biology and molecular imaging workflows, Propargyl-PEG3-amine is frequently selected to improve probe solubility and to tune the effective distance between the targeting or binding element and the attached reporter, supporting consistent performance across labeling formats.
3. PEG Linker Construction for Conjugates
Propargyl-PEG3-amine is commonly employed as a PEG spacer unit in multicomponent conjugate design, where flexible linkers are needed to mitigate aggregation and preserve accessibility of reactive groups. By introducing a terminal alkyne through Propargyl-PEG3-amine, teams can assemble conjugates such as polymer–probe hybrids, multivalent affinity constructs, and modular reagent libraries using azide-functional components. The PEG3 chain is especially useful when conjugate architecture must balance mobility with reduced nonspecific adsorption, which is relevant for assay reagents, analytical standards, and imaging-compatible labeling constructs.
4. Diagnostic Reagent and Assay Platforms
Propargyl-PEG3-amine is used to generate click-assembled diagnostic reagent components and assay platform materials that rely on modular coupling chemistry for reproducible batch-to-batch construction. Alkyne introduction via Propargyl-PEG3-amine enables rapid attachment of azide-functional reporters, capture elements, or signal amplification modules in microplate formats, bead-based assays, and lateral-flow-style reagent development workflows. The PEG spacer helps maintain reagent handling properties and supports stable conjugate formation during storage and assay preparation, making Propargyl-PEG3-amine a practical choice for building standardized click-assembled assay components.
Computed Properties
| XLogP3 | -1 |
| Hydrogen Bond Donor Count | 1 |
| Hydrogen Bond Acceptor Count | 4 |
| Rotatable Bond Count | 9 |
| Exact Mass | 187.12084340 g/mol |
| Monoisotopic Mass | 187.12084340 g/mol |
| Topological Polar Surface Area | 53.7Ų |
| Heavy Atom Count | 13 |
| Formal Charge | 0 |
| Complexity | 141 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| WO-2022272133-A2 | Protein stabilizing compounds containing usp7 ligands | 2021-06-25 |
| WO-2022169780-A1 | Selective bcl-xl protac compounds and methods of use | 2021-02-02 |
| EP-4087584-A2 | Cell surface receptor binding compounds and conjugates | 2020-01-10 |
| WO-2021111185-A1 | Compositions and methods related to molecular conjugation | 2019-12-02 |
| US-2021101905-A1 | Development of Imaging and Therapeutic Glucose Analogues for Sodium Dependent Glucose Transporters | 2019-10-04 |
Recommended Services
Recommended Articles
- Hoechst Dyes: Definition, Structure, Mechanism and Applications
- Mastering the Spectrum: A Comprehensive Guide to Cy3 and Cy5 Dyes
- Fluorescent Probes: Definition, Structure, Types and Application
- Fluorescent Dyes: Definition, Mechanism, Types and Application
- Coumarin Dyes: Definition, Structure, Benefits, Synthesis and Uses
- Unlocking the Power of Fluorescence Imaging: A Comprehensive Guide
- Cell Imaging: Definitions, Systems, Protocols, Dyes, and Applications
- Lipid Staining: Definition, Principles, Methods, Dyes, and Uses
- Flow Cytometry: Definition, Principles, Protocols, Dyes, and Uses
- Nucleic Acid Staining: Definition, Principles, Dyes, Procedures, and Uses
Recommended Products
Online Inquiry