
Cyanine7.5 hydrazide
| Catalog Number | R05-0011 |
| Category | Hydrazides |
| Molecular Formula | C45H52Cl2N4O |
| Molecular Weight | 735.82 |
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Product Introduction
Cyanine7.5 hydrazide is a hydrazide-functionalized near-infrared fluorescent dye used in bioconjugation and labeling chemistry. It features a hydrazide group that can react with aldehydes and ketones to form stable hydrazone linkages, making it suitable for labeling biomolecules such as proteins and nucleic acids. This reagent is often incorporated into fluorescence-based assays and imaging studies, supporting applications in molecular biology and bioorthogonal chemistry.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | NMR 1H, HPLC-MS (95%) |
| IUPAC Name | [6-[1,1-dimethyl-2-[2-[3-[2-(1,1,3-trimethylbenzo[e]indol-3-ium-2-yl)ethenyl]cyclohex-2-en-1-ylidene]ethylidene]benzo[e]indol-3-yl]hexanoylamino]azanium;dichloride |
| SMILES | CC1(C(=[N+](C2=C1C3=CC=CC=C3C=C2)C)C=CC4=CC(=CC=C5C(C6=C(N5CCCCCC(=O)N[NH3+])C=CC7=CC=CC=C76)(C)C)CCC4)C.[Cl-].[Cl-] |
| InChI | InChI=1S/C45H50N4O.2ClH/c1-44(2)39(48(5)37-25-23-33-16-8-10-18-35(33)42(37)44)27-21-31-14-13-15-32(30-31)22-28-40-45(3,4)43-36-19-11-9-17-34(36)24-26-38(43)49(40)29-12-6-7-20-41(50)47-46;;/h8-11,16-19,21-28,30H,6-7,12-15,20,29,46H2,1-5H3;2*1H |
| InChIKey | ZOOGOIXNYBHUPU-UHFFFAOYSA-N |
| Solubility | moderate solubility in water, good in polar organic solvents (DMF, DMSO, alcohols) |
| Appearance | green powder |
Product Specification
| ε, L⋅mol-1⋅cm-1 | 223000 |
| Excitation | 788 |
| Emission | 808 |
| Storage | 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
Application
Cyanine7.5 hydrazide is a reactive cyanine dye hydrazide designed for fluorescence labeling of carbonyl-containing biomolecules and materials, enabling covalent attachment through hydrazone formation with aldehydes and related reactive carbonyl groups. Its long-wavelength emission supports deep-tissue-compatible fluorescence workflows and multiplex-friendly imaging strategies when paired with appropriate excitation/emission filters. In labeling formats, the hydrazide handle is used to convert aldehyde-functionalized targets into stable fluorescent conjugates for microscopy, imaging, and fluorescence-based assays.
1. Aldehyde Biomolecule Labeling
Cyanine7.5 hydrazide is used to fluorescently tag aldehyde-functionalized proteins, peptides, and glycoconjugates produced by established oxidation/aldehyde-introduction workflows. Researchers commonly incorporate the dye into labeling pipelines for gel-based fluorescence readouts, conjugate tracking during purification, and downstream assay development where long-wavelength fluorescence improves visualization of labeled species. The hydrazide reactivity enables direct conversion of aldehyde groups into dye-bearing conjugates, supporting consistent labeling of biomolecule batches used in chemical biology and biomaterials studies.
2. Fluorescence Microscopy Tracing
Cyanine7.5 hydrazide is frequently selected for cellular and biomaterial imaging experiments that require bright far-red fluorescence with reduced background from common autofluorescence channels. In microscopy workflows, aldehyde-bearing cell-surface probes, extracellular matrix components, or polymeric materials can be labeled to visualize localization, trafficking, or distribution within complex samples. Imaging teams often use the dye in multicolor experiments where its emission can be separated from green/orange channels using standard far-red filter sets, enabling clearer spatial mapping of fluorescently tagged targets.
3. In Vivo Imaging Reagent Development
Cyanine7.5 hydrazide is used in research-grade molecular imaging reagent development to generate far-red fluorescent conjugates from aldehyde-functionalized targeting scaffolds, nanoparticles, or carrier systems. Imaging groups employ the resulting dye conjugates for preclinical-style fluorescence studies in small-animal or ex vivo contexts where long-wavelength emission helps reduce interference from tissue autofluorescence and scattering. The hydrazide labeling step is integrated into conjugate manufacturing workflows to produce fluorescent tracers for biodistribution experiments, ex vivo tissue imaging, and assay standard preparation.
4. Fluorescent Conjugate Standards
Cyanine7.5 hydrazide is also applied to prepare fluorescent reference materials and calibration standards for fluorescence quantification in assay development. By labeling aldehyde-containing model proteins, polymers, or bead surfaces, researchers generate reproducible far-red fluorescent reagents used for instrument setup, plate reader normalization, and method validation across fluorescence-based workflows. This use is particularly common when consistent dye loading and stable covalent attachment are needed for comparing signal across experimental runs.
Computed Properties
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 4 |
| Rotatable Bond Count | 9 |
| Exact Mass | 734.3518177 g/mol |
| Monoisotopic Mass | 734.3518177 g/mol |
| Topological Polar Surface Area | 63Ų |
| Heavy Atom Count | 52 |
| Formal Charge | 0 |
| Complexity | 1410 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 3 |
| Covalently-Bonded Unit Count | 3 |
| Compound Is Canonicalized | Yes |
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