BDP 650/665 alkyne

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BDP 650/665 alkyne

BDP 650/665 alkyne | 2006345-40-8

Catalog Number R02-0015
Category Alkynes
Molecular Formula C26H21N4BF2O2
Molecular Weight 470.28
Catalog Number Size Price Quantity
R02-0015 -- $--

Product Introduction

BDP 650/665 is a bright borondipyrromethene dye designed to fit Cy5 channel of various instruments. The terminal ethynyl group of BDP 650/665 alkyne can be easily conjugated with various azides using a copper-catalyzed Click chemistry reaction.

Chemical Information

Purity NMR 1H, HPLC-MS (95%)
IUPAC Name 2-[4-[(E)-2-[2-fluoro-12-(1H-pyrrol-2-yl)-3-aza-1-azonia-2-boratricyclo[7.3.0.03,7]dodeca-1(12),4,6,8,10-pentaen-4-yl]ethenyl]phenoxy]-N-prop-2-ynylacetamide;fluoride
Canonical SMILES B1(N2C(=CC=C2C=CC3=CC=C(C=C3)OCC(=O)NCC#C)C=C4[N+]1=C(C=C4)C5=CC=CN5)F.[F-]
InChI InChI=1S/C26H20BFN4O2.FH/c1-2-15-30-26(33)18-34-23-12-6-19(7-13-23)5-8-20-9-10-21-17-22-11-14-25(24-4-3-16-29-24)32(22)27(28)31(20)21;/h1,3-14,16-17H,15,18H2,(H,30,33);1H/b8-5+;
InChI Key SVLHJAJWKKRWIX-HAAWTFQLSA-N
Solubility soluble in DMF, DMSO
Appearance dark colored solid
  • Product Specification
ε, L⋅mol-1⋅cm-1 94000
Fluorescence Quantum Yield 0.52
Excitation 649
Emission 667
Storage 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

Hydrogen Bond Donor Count 2
Hydrogen Bond Acceptor Count 4
Rotatable Bond Count 7
Exact Mass 470.1725624 g/mol
Monoisotopic Mass 470.1725624 g/mol
Topological Polar Surface Area 62.1Ų
Heavy Atom Count 35
Formal Charge 0
Complexity 959
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 1
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 2
Compound Is Canonicalized Yes
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