![{[Name]}](https://resource.bocsci.com/structure/3%2C5-dimethyl-bdp.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/1418610-53-3.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/1238620-18-2.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/154793-49-4.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/154827-68-6.gif?v=2025011501)
![{[Name]}](https://resource.bocsci.com/structure/1397771-30-0.gif?v=2025011501)
Inquiry Basket
BDP 650/665 alkyne | CAS 2006345-40-8
| Catalog Number | R02-0015 |
| Category | BODIPY |
| Molecular Formula | C26H21N4BF2O2 |
| Molecular Weight | 470.28 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
BDP 650/665 is a bright borondipyrromethene dye designed to fit Cy5 channel of various instruments. The terminal ethynyl group of BDP 650/665 alkyne can be easily conjugated with various azides using a copper-catalyzed Click chemistry reaction.
Chemical Information
Product Specification
Computed Properties
| Purity | NMR 1H, HPLC-MS (95%) |
| IUPAC Name | 2-[4-[(E)-2-[2-fluoro-12-(1H-pyrrol-2-yl)-3-aza-1-azonia-2-boratricyclo[7.3.0.03,7]dodeca-1(12),4,6,8,10-pentaen-4-yl]ethenyl]phenoxy]-N-prop-2-ynylacetamide;fluoride |
| Canonical SMILES | B1(N2C(=CC=C2C=CC3=CC=C(C=C3)OCC(=O)NCC#C)C=C4[N+]1=C(C=C4)C5=CC=CN5)F.[F-] |
| InChI | InChI=1S/C26H20BFN4O2.FH/c1-2-15-30-26(33)18-34-23-12-6-19(7-13-23)5-8-20-9-10-21-17-22-11-14-25(24-4-3-16-29-24)32(22)27(28)31(20)21;/h1,3-14,16-17H,15,18H2,(H,30,33);1H/b8-5+; |
| InChIKey | SVLHJAJWKKRWIX-HAAWTFQLSA-N |
| Solubility | soluble in DMF, DMSO |
| Appearance | dark colored solid |
| ε, L⋅mol-1⋅cm-1 | 94000 |
| Fluorescence Quantum Yield | 0.52 |
| Excitation | 649 |
| Emission | 667 |
| Storage | 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 4 |
| Rotatable Bond Count | 7 |
| Exact Mass | 470.1725624 g/mol |
| Monoisotopic Mass | 470.1725624 g/mol |
| Topological Polar Surface Area | 62.1Ų |
| Heavy Atom Count | 35 |
| Formal Charge | 0 |
| Complexity | 959 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 1 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 2 |
| Compound Is Canonicalized | Yes |
Recommended Services
Recommended Articles
- Hoechst Dyes: Definition, Structure, Mechanism and Applications
- Mastering the Spectrum: A Comprehensive Guide to Cy3 and Cy5 Dyes
- Fluorescent Probes: Definition, Structure, Types and Application
- Fluorescent Dyes: Definition, Mechanism, Types and Application
- Coumarin Dyes: Definition, Structure, Benefits, Synthesis and Uses
- BODIPY Dyes: Definition, Structure, Synthesis and Uses
- Cyanine Dyes: Definition, Structure, Types and Uses
- Fluorescein Dyes: Definition, Structure, Synthesis and Uses
- Rhodamine Dyes: Definition, Structure, Uses, Excitation and Emission
- Unlocking the Power of Fluorescence Imaging: A Comprehensive Guide
- Cell Imaging: Definitions, Systems, Protocols, Dyes, and Applications
- Lipid Staining: Definition, Principles, Methods, Dyes, and Uses
- Flow Cytometry: Definition, Principles, Protocols, Dyes, and Uses
- Nucleic Acid Staining: Definition, Principles, Dyes, Procedures, and Uses
- DNA Staining: Definition, Procedures, Benefits, Dyes and Uses
- Cell Staining: Definition, Principles, Protocols, Dyes, and Uses
- Ion Imaging: Definition, Principles, Benefits, Dyes, and Uses
- Fluorescent Labeling: Definition, Principles, Types and Applications
Recommended Products
Online Inquiry
