
AF 594 azide
| Catalog Number | R01-0462 |
| Category | Alexa Fluor |
| Molecular Formula | C38H39KN6O10S2 |
| Molecular Weight | 842.98 |
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Product Introduction
AF 594 is a water-soluble red-fluorescent dye with high fluorescence quantum yield and high photostability.
Chemical Information
Product Specification
Application
Chemical Information
| IUPAC Name | potassium;[13-[5-(3-azidopropylcarbamoyl)-2-carboxyphenyl]-6,7,7,19,19,20-hexamethyl-17-(sulfonatomethyl)-2-oxa-6-aza-20-azoniapentacyclo[12.8.0.03,12.05,10.016,21]docosa-1(22),3(12),4,8,10,13,15,17,20-nonaen-9-yl]methanesulfonate |
| SMILES | CC1(C=C(C2=CC3=C(C=C2N1C)OC4=CC5=[N+](C(C=C(C5=CC4=C3C6=C(C=CC(=C6)C(=O)NCCCN=[N+]=[N-])C(=O)O)CS(=O)(=O)[O-])(C)C)C)CS(=O)(=O)[O-])C.[K+] |
| InChI | InChI=1S/C38H40N6O10S2.K/c1-37(2)17-22(19-55(48,49)50)25-13-28-32(15-30(25)43(37)5)54-33-16-31-26(23(20-56(51,52)53)18-38(3,4)44(31)6)14-29(33)34(28)27-12-21(8-9-24(27)36(46)47)35(45)40-10-7-11-41-42-39;/h8-9,12-18H,7,10-11,19-20H2,1-6H3,(H3-,40,45,46,47,48,49,50,51,52,53);/q;+1/p-1 |
| InChIKey | SACRXPKEVWEEMA-UHFFFAOYSA-M |
| Appearance | Dark-blue Crystals |
Product Specification
| Excitation | 586 |
| Emission | 613 |
Application
AF 594 azide is a fluorescent azide building block designed for copper-free click chemistry workflows that install an AF 594 fluorophore onto biomolecules, polymers, and biomaterial surfaces bearing complementary cyclooctyne/alkyne handles. Its azide functionality enables robust conjugation for fluorescence labeling and imaging reagent construction, while its red/orange emission supports common widefield and confocal fluorescence microscopy and fluorescence-based assay development. Researchers use AF 594 azide to generate targeted or modular labeling reagents where the fluorophore must be appended under conditions compatible with sensitive biological materials.
1. Biomolecule Labeling
AF 594 azide is frequently used to fluorescently label proteins, peptides, and affinity reagents in chemical biology workflows that require modular attachment of a red/orange dye. In practice, researchers prepare conjugates by first introducing a cyclooctyne/alkyne handle onto the biomolecule and then coupling AF 594 azide to generate fluorescent probes for binding studies, localization experiments, and reagent tracking. This approach is especially useful when the labeling needs to be introduced late in the workflow, such as for assembling multi-component probe sets for microscopy or fluorescence-based assays.
2. Fluorescence Microscopy Staining
AF 594 azide supports fluorescence imaging applications where a stable, dye-bearing conjugate is required to visualize labeled biomolecules in fixed samples or engineered materials. Lab teams use AF 594 azide to build microscopy stains for tracking biomolecular distributions, following conjugate uptake in labeled constructs, and mapping fluorescently tagged components within hydrogels, coatings, or other functionalized substrates. The azide-driven installation strategy helps maintain flexibility in experimental design, enabling consistent labeling across batches of conjugates used for imaging readouts.
3. Flow Cytometry Dye Conjugates
AF 594 azide is used to construct fluorescent conjugates for flow cytometry workflows that rely on robust dye installation onto cell-binding reagents or engineered targeting constructs. Researchers commonly incorporate AF 594 into antibody or ligand conjugates to quantify binding by fluorescence intensity and to monitor labeling uniformity across experimental conditions. The azide handle also supports parallel synthesis of multiple AF 594-labeled reagents, which is useful when building multi-color panels that require consistent dye chemistry and reproducible conjugate preparation.
4. Biomaterial Surface Functionalization
AF 594 azide is applied in biomaterials science to generate fluorescently labeled surfaces and coatings for material characterization and imaging-guided studies. Teams use the azide to attach AF 594 to cyclooctyne-functionalized polymers, nanoparticles, or hydrogel components, producing fluorescent materials that can be imaged to assess distribution, coating uniformity, or component localization. This labeling strategy is particularly valuable for developing fluorescence-enabled biomaterial platforms used in microscopy readouts and fluorescence-based characterization assays.
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