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6-JOE SE | 113394-23-3
| Catalog Number | A19-0007 |
| Category | DNA Stains |
| Molecular Formula | C27H17Cl2NO11 |
| Molecular Weight | 602.34 |
| Catalog Number | Size | Price | Quantity |
|---|---|---|---|
| A19-0007 | -- | $-- |
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Product Introduction
6-JOE SE is a conventional fluorophore used in automated DNA sequencing.
Chemical Information |
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|---|---|
| Synonyms | 6-JOE OSu; Spiro[isobenzofuran-1(3H),9'-[9H]xanthene]-6-carboxylic acid, 4',5'-dichloro-3',6'-dihydroxy-2',7'-dimethoxy-3-oxo-, 2,5-dioxo-1-pyrrolidinyl ester; 2,5-Dioxo-1-pyrrolidinyl 4',5'-dichloro-3',6'-dihydroxy-2',7'-dimethoxy-3-oxospiro[isobenzofuran-1(3H),9'-[9H]xanthene]-6-carboxylate; 2,5-Pyrrolidinedione, 1-[[(4',5'-dichloro-3',6'-dihydroxy-2',7'-dimethoxy-3-oxospiro[isobenzofuran-1(3H),9'-[9H]xanthen]-6-yl)carbonyl]oxy]-; JOE NHS Ester; 2,5-dioxopyrrolidin-1-yl 4',5'-dichloro-3',6'-dihydroxy-2',7'-dimethoxy-3-oxo-3H-spiro[isobenzofuran-1,9'-xanthene]-6-carboxylate |
| Purity | ≥95% |
| IUPAC Name | (2,5-dioxopyrrolidin-1-yl) 4',5'-dichloro-3',6'-dihydroxy-2',7'-dimethoxy-1-oxospiro[2-benzofuran-3,9'-xanthene]-5-carboxylate |
| Canonical SMILES | COC1=C(C(=C2C(=C1)C3(C4=CC(=C(C(=C4O2)Cl)O)OC)C5=C(C=CC(=C5)C(=O)ON6C(=O)CCC6=O)C(=O)O3)Cl)O |
| InChI | InChI=1S/C27H17Cl2NO11/c1-37-15-8-13-23(19(28)21(15)33)39-24-14(9-16(38-2)22(34)20(24)29)27(13)12-7-10(3-4-11(12)26(36)40-27)25(35)41-30-17(31)5-6-18(30)32/h3-4,7-9,33-34H,5-6H2,1-2H3 |
| InChI Key | UUVBVONAGUSCCH-UHFFFAOYSA-N |
| Density | 1.79±0.1 g/cm3 |
| Appearance | Solid |
| Boiling Point | 835.6±75.0°C at 760 mmHg |
- Product Specification
| Storage | Store at -20°C |
| Signal | Warning |
| GHS Hazard Statements | H315 (100%): Causes skin irritation [Warning Skin corrosion/irritation] H335 (100%): May cause respiratory irritation [Warning Specific target organ toxicity, single exposure; Respiratory tract irritation] |
| Precautionary Statement Codes | P261, P264, P271, P280, P302+P352, P304+P340, P319, P321, P332+P317, P362+P364, P403+P233, P405, and P501 (The corresponding statement to each P-code can be found at the GHS Classification page.) |
Computed Properties | |
|---|---|
| XLogP3 | 3.6 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 11 |
| Rotatable Bond Count | 5 |
| Exact Mass | 601.0178657 g/mol |
| Monoisotopic Mass | 601.0178657 g/mol |
| Topological Polar Surface Area | 158Ų |
| Heavy Atom Count | 41 |
| Formal Charge | 0 |
| Complexity | 1060 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| WO-2022241209-A1 | Compositions and methods for use in identifying or quantifying microorganisms | 2021-05-13 |
| WO-2022152777-A1 | Storage stable caged haptens | 2021-01-15 |
| WO-2022136651-A1 | Method for determining active sars-cov-2 infections | 2020-12-23 |
| WO-2022119932-A1 | Anti-human cd10 antibodies for use in immunohistochemistry (ihc) protocols to diagnose cancer | 2020-12-02 |
| EP-4087587-A1 | Targeted and localized in vivo delivery of oligonucleotides | 2020-01-11 |
Applications of Fluorescent Probes & Dyes
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