Ethidium monoazide bromide | 58880-05-0
Catalog Number | A19-0037 |
Category | DNA Stains |
Molecular Formula | C21H18BrN5 |
Molecular Weight | 420.31 |
Catalog Number | Size | Price | Quantity |
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A19-0037 | -- | $-- |
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Product Introduction
Ethidium monoazide bromide is a fluorescent nucleic acid stain which binds covalently to nucleic acids both in solution and in cells.
Chemical Information |
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Related CAS | 69498-50-6 (free base) |
Synonyms | EMA |
IUPAC Name | 8-azido-5-ethyl-6-phenylphenanthridin-5-ium-3-amine;bromide |
Canonical SMILES | CC[N+]1=C2C=C(C=CC2=C3C=CC(=CC3=C1C4=CC=CC=C4)N=[N+]=[N-])N.[Br-] |
InChI | InChI=1S/C21H17N5.BrH/c1-2-26-20-12-15(22)8-10-18(20)17-11-9-16(24-25-23)13-19(17)21(26)14-6-4-3-5-7-14;/h3-13,22H,2H2,1H3;1H |
InChI Key | GHUXAYLZEGLXDA-UHFFFAOYSA-N |
Appearance | Solid Powder |
- Product Specification
- Application
Excitation | 504 nm |
Emission | 600nm |
Ethidium monoazide bromide, commonly referred to as EMA, is a photoreactive DNA-binding dye with several crucial applications in bioscience. Here are some key applications of Ethidium monoazide bromide:
Microbiological Viability Assays
Ethidium monoazide bromide is widely used in microbiology to distinguish between live and dead cells. When exposed to light, EMA binds to the DNA of dead cells, preventing them from being amplified in PCR-based assays. This selective binding allows researchers to quantify viable bacterial populations in various samples accurately.
Clinical Diagnostics
In clinical diagnostics, EMA is used in conjunction with quantitative PCR (qPCR) to improve the specificity of pathogen detection. EMA-treated samples allow only the DNA from viable pathogens to be amplified, reducing false positives from dead cells. This method is particularly useful in diagnosing infections and monitoring treatment efficacy in conditions such as sepsis and urinary tract infections.
Environmental Monitoring
EMA is employed in environmental studies to assess the microbial quality of water and soil samples. Treating samples with EMA helps in the differentiation of live microorganisms from dead ones, providing a more accurate picture of the microbial community health. This information is vital for monitoring pollution levels, assessing bioremediation efforts, and ensuring water safety.
Food Safety Testing
In the food industry, EMA is used to enhance the detection of viable foodborne pathogens. By binding to the DNA of dead cells in food samples, EMA enables more accurate quantification of living bacteria, such as Salmonella and Listeria, when combined with PCR techniques. This application is crucial for ensuring food safety and compliance with regulatory standards.
Computed Properties | |
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Hydrogen Bond Donor Count | 1 |
Hydrogen Bond Acceptor Count | 4 |
Rotatable Bond Count | 3 |
Exact Mass | 419.07456 g/mol |
Monoisotopic Mass | 419.07456 g/mol |
Topological Polar Surface Area | 44.3Ų |
Heavy Atom Count | 27 |
Formal Charge | 0 |
Complexity | 525 |
Isotope Atom Count | 0 |
Defined Atom Stereocenter Count | 0 |
Undefined Atom Stereocenter Count | 0 |
Defined Bond Stereocenter Count | 0 |
Undefined Bond Stereocenter Count | 0 |
Covalently-Bonded Unit Count | 2 |
Compound Is Canonicalized | Yes |
Patents
Publication Number | Title | Priority Date |
---|---|---|
CN-114891903-A | A rapid detection kit and detection method for Salmonella viable bacteria based on PMAxx-LAMP-NALFA | 2022-04-25 |
CN-114350852-A | Quantitative detection method for animal-derived live viruses | 2021-12-31 |
CN-113502352-B | EMA-ddPCR primer and probe for detecting infectious ASFV and application | 2021-07-01 |
CN-112831582-B | A method for detecting live unculturable Staphylococcus aureus | 2021-04-11 |
US-11535902-B2 | RNA separation and related techniques for determining viruses such as coronaviruses | 2021-03-17 |
Applications of Fluorescent Probes & Dyes
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