
sulfo-Cyanine7 dicarboxylic acid
| Catalog Number | F03-0016 |
| Category | sulfo-Cyanine7 |
| Molecular Formula | C42H51N2KO10S2 |
| Molecular Weight | 847.09 |
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Product Introduction
Sulfo-Cyanine7 dicarboxylic acid (Сy7 analogue) is a water soluble, bifunctional NIR dye derivative bearing two carboxylic acid functional groups.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | NMR 1H, HPLC-MS (95%) |
| IUPAC Name | potassium;(2E)-1-(5-carboxypentyl)-2-[(2E)-2-[3-[(E)-2-[1-(5-carboxypentyl)-3,3-dimethyl-5-sulfonatoindol-1-ium-2-yl]ethenyl]cyclohex-2-en-1-ylidene]ethylidene]-3,3-dimethylindole-5-sulfonate |
| SMILES | CC1(C2=C(C=CC(=C2)S(=O)(=O)[O-])[N+](=C1C=CC3=CC(=CC=C4C(C5=C(N4CCCCCC(=O)O)C=CC(=C5)S(=O)(=O)[O-])(C)C)CCC3)CCCCCC(=O)O)C.[K+] |
| InChI | InChI=1S/C42H52N2O10S2.K/c1-41(2)33-27-31(55(49,50)51)18-20-35(33)43(24-9-5-7-14-39(45)46)37(41)22-16-29-12-11-13-30(26-29)17-23-38-42(3,4)34-28-32(56(52,53)54)19-21-36(34)44(38)25-10-6-8-15-40(47)48;/h16-23,26-28H,5-15,24-25H2,1-4H3,(H3-,45,46,47,48,49,50,51,52,53,54);/q;+1/p-1 |
| InChIKey | QEBLXZAXBRSTPL-UHFFFAOYSA-M |
| Solubility | good in water, DMF, DMSO |
| Appearance | dark green solid |
Product Specification
| ε, L⋅mol-1⋅cm-1 | 240600 |
| Excitation | 750 |
| Emission | 773 |
| Storage | 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
Application
Sulfo-Cyanine7 dicarboxylic acid is a water-soluble, sulfonated cyanine dye commonly used as a near-infrared (NIR) fluorescence label for biomolecular and materials research. Its cyanine chromophore provides strong NIR emission that is frequently leveraged for low-background fluorescence imaging and labeling workflows where reduced autofluorescence is beneficial. The dicarboxylic acid functionality supports conjugation strategies that connect the dye to proteins, peptides, and other targeting scaffolds for fluorescence-based detection and visualization.
1. Protein And Antibody Labeling
Sulfo-Cyanine7 dicarboxylic acid is used by bioconjugation teams to generate NIR fluorescent protein conjugates for imaging and binding studies. Researchers commonly incorporate the dye into labeling workflows for antibodies, antibody fragments, and affinity reagents to track biomolecule localization in assay formats and microscopy experiments. The dye's sulfonated, water-compatible character helps maintain labeling performance in aqueous buffers, supporting downstream handling in fluorescence readouts that rely on NIR detection.
2. Fluorescence Imaging Tracing
Sulfo-Cyanine7 dicarboxylic acid is widely applied in fluorescence imaging and tracing experiments where NIR signal is collected to improve contrast against background autofluorescence. Cell biology groups and materials scientists use dye-labeled biomolecules to visualize uptake, distribution, and transport in experimental systems compatible with NIR-capable imaging instrumentation. In these workflows, the dye serves as a robust fluorescent tag for longitudinal studies of labeled constructs, including conjugated probes used to map interactions at surfaces and within complex sample matrices.
3. NIR Bioassay Reagent Development
Sulfo-Cyanine7 dicarboxylic acid supports fluorescence assay development by providing an NIR reporter for quantitative readouts in microplate or cuvette-based formats. Assay developers commonly use the dye to label assay components such as binding partners, detection reagents, or standards to enable fluorescence monitoring with NIR channels. The resulting labeled reagents are used in fluorescence-based binding and interaction assays, as well as in platform development where a spectrally separated reporter is advantageous for multiplexing or background management.
4. Biomaterial And Surface Functionalization
Sulfo-Cyanine7 dicarboxylic acid is used in biomaterials research to create fluorescently trackable surfaces and coatings for material characterization. Researchers incorporate the dye into labeling schemes for polymeric matrices, hydrogels, and surface-modified constructs to monitor adsorption, retention, and spatial distribution using fluorescence microscopy or NIR imaging systems. This application is especially valuable when the fluorescent tag must remain compatible with aqueous processing and when NIR readout supports visualization in optically complex environments.
Computed Properties
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 11 |
| Rotatable Bond Count | 16 |
| Exact Mass | 846.26221966 g/mol |
| Monoisotopic Mass | 846.26221966 g/mol |
| Topological Polar Surface Area | 212Ų |
| Heavy Atom Count | 57 |
| Formal Charge | 0 |
| Complexity | 1840 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 3 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 2 |
| Compound Is Canonicalized | Yes |
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