
Sulfo-Cyanine7 carboxylic acid
| Catalog Number | F03-0015 |
| Category | sulfo-Cyanine7 |
| Molecular Formula | C37H43N2KO8S2 |
| Molecular Weight | 746.97 |
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Product Introduction
Sulfo-Cyanine7 carboxylic acid is non-reactive water soluble near infrared dye. The reagent is useful as a fluorescent marker in NIR range when attachment to other molecules is not desired. It has high hydrophilicity and aqueous solubility, improved quantum yield in NIR range, and very high molar extinction coefficient. This reagent contains free carboxylic acid function. Pre-activated activated ester-sulfo-Cyanine7 NHS ester is also available.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Related CAS | 2104632-30-4 (sodium salt) 2104632-29-1 (inner salt) |
| Synonyms | potassium 1-(5-carboxypentyl)-3,3-dimethyl-2-((E)-2-((E)-3-(2-((E)-1,3,3-trimethyl-5-sulfonatoindolin-2-ylidene)ethylidene)cyclohex-1-en-1-yl)vinyl)-3H-indol-1-ium-5-sulfonate |
| Purity | NMR 1H, HPLC (95%) |
| IUPAC Name | potassium;1-(5-carboxypentyl)-3,3-dimethyl-2-[2-[3-[2-(1,3,3-trimethyl-5-sulfonatoindol-1-ium-2-yl)ethenyl]cyclohex-2-en-1-ylidene]ethylidene]indole-5-sulfonate |
| SMILES | CC1(C2=C(C=CC(=C2)S(=O)(=O)[O-])[N+](=C1C=CC3=CC(=CC=C4C(C5=C(N4CCCCCC(=O)O)C=CC(=C5)S(=O)(=O)[O-])(C)C)CCC3)C)C.[K+] |
| InChI | InChI=1S/C37H44N2O8S2.K/c1-36(2)29-23-27(48(42,43)44)15-17-31(29)38(5)33(36)19-13-25-10-9-11-26(22-25)14-20-34-37(3,4)30-24-28(49(45,46)47)16-18-32(30)39(34)21-8-6-7-12-35(40)41;/h13-20,22-24H,6-12,21H2,1-5H3,(H2-,40,41,42,43,44,45,46,47);/q;+1/p-1 |
| InChIKey | DATDQQRBWIPXJJ-UHFFFAOYSA-M |
| Solubility | Soluble in water, DMF, DMSO (0.10 M = 76 g/L). Practically insoluble in non-polar organic solvents. |
| Appearance | dark green powder |
Product Specification
| ε, L⋅mol-1⋅cm-1 | 240600 |
| Excitation | 750 |
| Emission | 773 |
| Storage | 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
Application
Sulfo-Cyanine7 carboxylic acid is a water-soluble, sulfonated cyanine dye designed for fluorescent labeling workflows where strong near-infrared (NIR) imaging performance and reduced nonspecific interactions are important. Its carboxylic acid functionality enables convenient conjugation strategies to biomolecules, polymers, and surfaces used in fluorescence microscopy, imaging, and quantitative fluorescence assays.
1. Fluorescent Protein Labeling
Sulfo-Cyanine7 carboxylic acid is frequently used by protein and antibody labeling teams to generate NIR fluorescent conjugates for imaging and binding studies. Researchers commonly incorporate it into labeling pipelines for tracking biomolecule localization in cell-based experiments, monitoring binding workflows, and preparing fluorescent standards for assay development. The sulfonated, water-soluble character helps support aqueous conjugation and handling during reagent preparation, while the carboxyl group provides a practical handle for downstream coupling to amine-bearing or activated biomolecule formats.
2. Fluorescence Microscopy Imaging
Sulfo-Cyanine7 carboxylic acid supports fluorescence microscopy applications where near-infrared detection is leveraged to improve visualization in thick samples or low-background imaging conditions. Imaging groups use cyanine7-based labeling reagents to trace labeled targets in cultured cells, to visualize labeled biomaterials, and to build multicolor imaging panels when instrument channels are configured for the cyanine7 spectral region. In these workflows, the dye's NIR emission and aqueous solubility help streamline staining and conjugate preparation for microscopy experiments that require robust fluorescent readout.
3. Fluorescent Bioassay Development
Sulfo-Cyanine7 carboxylic acid is used in fluorescence assay development to create labeled reagents for quantitative signal readouts in plate-based and cuvette-based formats. Assay developers commonly prepare fluorescent conjugates that report binding, distribution, or reaction progress through NIR fluorescence, enabling compatibility with common fluorescence plate readers equipped for cyanine7 detection. The carboxylic acid functionality supports integration into labeling schemes that generate stable fluorescent assay components for research-grade screening, reagent optimization, and fluorescence-based characterization of biomolecular interactions.
4. Nanoparticle And Surface Labeling
Sulfo-Cyanine7 carboxylic acid is also applied in materials research to label nanoparticles, hydrogels, and other functional surfaces for fluorescence tracking and characterization. Researchers use cyanine7 labeling to follow surface association, monitor labeling uniformity, and generate fluorescent materials for imaging-based studies of biomaterial behavior. The dye's sulfonated structure supports aqueous processing during surface functionalization and helps maintain practical handling during material preparation for microscopy and fluorescence readouts.
Computed Properties
| Hydrogen Bond Donor Count | 1 |
| Hydrogen Bond Acceptor Count | 9 |
| Rotatable Bond Count | 10 |
| Exact Mass | 746.20979017 g/mol |
| Monoisotopic Mass | 746.20979017 g/mol |
| Topological Polar Surface Area | 175Ų |
| Heavy Atom Count | 50 |
| Formal Charge | 0 |
| Complexity | 1650 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 3 |
| Covalently-Bonded Unit Count | 2 |
| Compound Is Canonicalized | Yes |
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