Sulfo-Cyanine5 azide

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Sulfo-Cyanine5 azide

Sulfo-Cyanine5 azide

Catalog Number F03-0006
Category sulfo-Cyanine5
Molecular Formula C35H43N6KO7S2
Molecular Weight 762.98
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Product Introduction

Sulfo-Cyanine5 azide is a reactive fluorescent dye belonging to the cyanine dye family, characterized by its extended conjugated aromatic system. It features an azide functional group, enabling bioorthogonal conjugation with alkyne-modified biomolecules through the copper-catalyzed azide-alkyne cycloaddition (CuAAC) reaction. This dye exhibits excitation and emission maxima in the near-infrared region, making it suitable for fluorescence imaging applications, including protein labeling and cellular imaging, where reduced background fluorescence is desired.

  • Chemical Information

  • Product Specification

  • Computed Properties

Chemical Information

Synonyms diSulfo-Cy3 azide
Purity NMR 1H, HPLC-MS (95%)
IUPAC Name potassium;1-[6-(3-azidopropylamino)-6-oxohexyl]-3,3-dimethyl-2-[5-(1,3,3-trimethyl-5-sulfonatoindol-1-ium-2-yl)penta-2,4-dienylidene]indole-5-sulfonate
SMILES CC1(C2=C(C=CC(=C2)S(=O)(=O)[O-])[N+](=C1C=CC=CC=C3C(C4=C(N3CCCCCC(=O)NCCCN=[N+]=[N-])C=CC(=C4)S(=O)(=O)[O-])(C)C)C)C.[K+]
InChI InChI=1S/C35H44N6O7S2.K/c1-34(2)27-23-25(49(43,44)45)16-18-29(27)40(5)31(34)13-8-6-9-14-32-35(3,4)28-24-26(50(46,47)48)17-19-30(28)41(32)22-11-7-10-15-33(42)37-20-12-21-38-39-36;/h6,8-9,13-14,16-19,23-24H,7,10-12,15,20-22H2,1-5H3,(H2-,37,42,43,44,45,46,47,48);/q;+1/p-1
InChIKey OUOBEWSMOOZRDW-UHFFFAOYSA-M
Solubility very high in water
Appearance dark blue crystals

Product Specification

ε, L⋅mol-1⋅cm-1 271000
Fluorescence Quantum Yield 0.28
Excitation 646
Emission 662
Storage 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

Hydrogen Bond Donor Count 1
Hydrogen Bond Acceptor Count 10
Rotatable Bond Count 14
Exact Mass 762.22717156 g/mol
Monoisotopic Mass 762.22717156 g/mol
Topological Polar Surface Area 181Ų
Heavy Atom Count 51
Formal Charge 0
Complexity 1630
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 3
Covalently-Bonded Unit Count 2
Compound Is Canonicalized Yes

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