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R6G azide, 5-isomer
| Catalog Number | F05-0011 |
| Category | Rhodamine |
| Molecular Formula | C30H32N6O4 |
| Molecular Weight | 540.61 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
R6G (rhodamine 6G) is a yellow emitting xanthene dye. It has been used for DNA sequencing before. Now this dye is often used for qPCR. This is a pure 5-isomer of R6G with azide group.
Chemical Information
Product Specification
Computed Properties
| Purity | NMR 1H, HPLC-MS (95%) |
| IUPAC Name | 5-(3-azidopropylcarbamoyl)-2-[3-(ethylamino)-6-ethylimino-2,7-dimethylxanthen-9-yl]benzoic acid |
| Canonical SMILES | CCNC1=CC2=C(C=C1C)C(=C3C=C(C(=NCC)C=C3O2)C)C4=C(C=C(C=C4)C(=O)NCCCN=[N+]=[N-])C(=O)O |
| InChI | InChI=1S/C30H32N6O4/c1-5-32-24-15-26-22(12-17(24)3)28(23-13-18(4)25(33-6-2)16-27(23)40-26)20-9-8-19(14-21(20)30(38)39)29(37)34-10-7-11-35-36-31/h8-9,12-16,32H,5-7,10-11H2,1-4H3,(H,34,37)(H,38,39) |
| InChIKey | DQUMJWCOENERIZ-UHFFFAOYSA-N |
| Solubility | Good in DMF, DMSO, alcohols |
| Appearance | Orange to Brown powder |
| CF260 | 0.18 |
| CF280 | 0.17 |
| Fluorescence Quantum Yield | 0.95 |
| Mass Spec M+ Increment | 540.3 |
| Excitation | 519 |
| Emission | 546 |
| Storage | Storage: 24 months after receival at -20 °C in the Dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
| XLogP3 | 4.9 |
| Hydrogen Bond Donor Count | 3 |
| Hydrogen Bond Acceptor Count | 8 |
| Rotatable Bond Count | 10 |
| Exact Mass | 540.24850352 g/mol |
| Monoisotopic Mass | 540.24850352 g/mol |
| Topological Polar Surface Area | 114Ų |
| Heavy Atom Count | 40 |
| Formal Charge | 0 |
| Complexity | 1150 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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