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N-(DBCO-PEG4)-N-Biotin-PEG4-acid
| Catalog Number | R01-0325 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C50H71N5O14S |
| Molecular Weight | 998.2 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
N-(DBCO-PEG4)-N-Biotin-PEG4-acid is a biotinylation reagent which enable click chemistry with azide.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 98% |
| IUPAC Name | 3-[2-[2-[2-[2-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoyl-[2-[2-[2-[2-[2-[[4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-4-oxobutanoyl]amino]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]amino]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid |
| SMILES | C1C2C(C(S1)CCCCC(=O)N(CCOCCOCCOCCOCCC(=O)O)CCOCCOCCOCCOCCNC(=O)CCC(=O)N3CC4=CC=CC=C4C#CC5=CC=CC=C53)NC(=O)N2 |
| InChI | InChI=1S/C50H71N5O14S/c56-45(15-16-47(58)55-37-41-9-2-1-7-39(41)13-14-40-8-3-4-10-43(40)55)51-18-22-63-26-30-67-34-36-69-32-28-65-24-20-54(19-23-64-27-31-68-35-33-66-29-25-62-21-17-48(59)60)46(57)12-6-5-11-44-49-42(38-70-44)52-50(61)53-49/h1-4,7-10,42,44,49H,5-6,11-12,15-38H2,(H,51,56)(H,59,60)(H2,52,53,61)/t42-,44-,49-/m0/s1 |
| InChIKey | UTSGOLXAYDVUIL-QXMSZIEOSA-N |
Product Specification
| Storage | -20 °C |
Application
N-(DBCO-PEG4)-N-Biotin-PEG4-acid is a DBCO-functionalized, PEGylated biotin conjugate designed for strain-promoted azide–alkyne cycloaddition (SPAAC) click chemistry. The reagent combines a cyclooctyne (DBCO) handle for rapid bioorthogonal labeling with a biotin recognition motif and a terminal carboxylic acid for conjugation or surface immobilization workflows. Its flexible PEG spacers help reduce steric hindrance and improve accessibility of both the DBCO and biotin groups, making it well suited for building modular affinity probes, labeling reagents, and immobilized capture materials used across chemical biology and biomaterials research.
1. Biotin Affinity Labeling
N-(DBCO-PEG4)-N-Biotin-PEG4-acid is widely used to generate biotinylated probes and assay reagents where a click-installed biotin handle is required for downstream capture, detection, or enrichment. Researchers commonly employ it to functionalize azide-bearing biomolecules, polymers, or nanoparticles and then use streptavidin or avidin-based workflows to isolate labeled targets from complex mixtures. The PEG spacing and the presence of a free carboxylic acid support robust conjugation strategies when biotin must be presented at an accessible distance from the labeled scaffold, improving reliability in affinity-based signal generation and purification pipelines.
2. Surface Immobilization Probes
N-(DBCO-PEG4)-N-Biotin-PEG4-acid supports the creation of immobilized affinity surfaces for biosensing, binding studies, and materials characterization. The terminal acid functionality enables coupling to activated surfaces or linkers, while the DBCO group provides a convenient SPAAC handle to attach the biotin-bearing construct to azide-functionalized materials or to assemble multilayer interfaces. This combination is particularly useful for preparing streptavidin/avidin-compatible capture layers, microarray formats, and solid-phase reagent coatings where controlled presentation of biotin is important for consistent binding behavior.
3. Imaging and Enrichment Workflows
N-(DBCO-PEG4)-N-Biotin-PEG4-acid is frequently selected for molecular imaging reagent development and enrichment strategies that rely on biotin-mediated localization or recovery. In chemical biology workflows, the reagent can be clicked onto azide-tagged imaging scaffolds, reporters, or targeting constructs, enabling subsequent affinity-based concentration or cleanup using streptavidin/avidin reagents. The PEG architecture helps maintain accessibility of the biotin moiety after labeling, which is valuable when probes must remain functional after conjugation to larger biomolecular assemblies or when background reduction depends on efficient affinity capture.
4. Biomaterials Functionalization
N-(DBCO-PEG4)-N-Biotin-PEG4-acid is used to functionalize biomaterials and soft matter systems with orthogonal chemical handles for modular assembly. The DBCO group enables SPAAC coupling to azide-bearing hydrogels, polymer networks, or surface-modified particles, while the biotin motif provides an affinity tag for subsequent binding of streptavidin/avidin conjugates. Materials scientists also leverage the carboxylic acid to incorporate the reagent into linker chemistries that create stable, reproducible functional coatings, supporting the fabrication of affinity-tagged scaffolds for research-grade assays, reagent immobilization, and multicomponent material assembly.
Computed Properties
| XLogP3 | 0.4 |
| Hydrogen Bond Donor Count | 4 |
| Hydrogen Bond Acceptor Count | 15 |
| Rotatable Bond Count | 38 |
| Exact Mass | 997.47182313 g/mol |
| Monoisotopic Mass | 997.47182313 g/mol |
| Topological Polar Surface Area | 247Ų |
| Heavy Atom Count | 70 |
| Formal Charge | 0 |
| Complexity | 1620 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 3 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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