
Hydroxy-PEG7-DBCO
| Catalog Number | R01-0380 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C35H48N2O10 |
| Molecular Weight | 656.8 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Hydroxy-PEG7-DBCO is a PEG linker containing a DBCO moiety and a terminal primary hydroxyl group. The hydroxyl can react with a variety of functional groups and the hydrophilic PEG spacer arm can provide better solubility to labeled molecules. DBCO is commonly used for copper-free Click Chemistry reactions.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 98% |
| IUPAC Name | 4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-N-[2-[2-[2-[2-[2-[2-[2-(2-hydroxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-4-oxobutanamide |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCC(=O)NCCOCCOCCOCCOCCOCCOCCOCCO |
| InChI | InChI=1S/C35H48N2O10/c38-14-16-42-18-20-44-22-24-46-26-28-47-27-25-45-23-21-43-19-17-41-15-13-36-34(39)11-12-35(40)37-29-32-7-2-1-5-30(32)9-10-31-6-3-4-8-33(31)37/h1-8,38H,11-29H2,(H,36,39) |
| InChIKey | ZCAHYYUKLBROSC-UHFFFAOYSA-N |
| Solubility | DMSO, DCM, DMF |
Product Specification
| Storage | -20 °C |
Application
Hydroxy-PEG7-DBCO is a PEGylated dibenzocyclooctyne (DBCO) click chemistry reagent designed for copper-free strain-promoted azide–alkyne cycloaddition (SPAAC). The structure couples a hydrophilic hydroxy-terminated PEG spacer to the highly reactive DBCO cyclooctyne, enabling efficient conjugation under conditions compatible with sensitive biomolecules and aqueous workflows. This reagent is commonly used to introduce a DBCO handle onto PEG-containing materials, probes, and macromolecular constructs for downstream coupling to azide-bearing partners.
1. PEGylated Bioconjugation
Hydroxy-PEG7-DBCO is widely used in bioconjugation workflows where a flexible, water-soluble PEG spacer improves solubility and reduces nonspecific interactions around the reactive DBCO group. Researchers incorporate Hydroxy-PEG7-DBCO into antibody fragments, peptides, proteins, and enzyme conjugates to create azide-reactive constructs for modular assembly with azide-tagged biomolecules. The hydroxy handle and PEG length are particularly relevant when designing multicomponent libraries, where controlled spacing can influence labeling density and accessibility of the clickable moiety for subsequent conjugation steps.
2. Surface And Material Functionalization
Hydroxy-PEG7-DBCO supports click-ready surface and biomaterials engineering by enabling attachment of DBCO-bearing PEG layers to azide-functional substrates or by serving as the azide-reactive component in material-to-biomolecule coupling schemes. In polymer and nanoparticle development, the PEG7 spacer helps maintain colloidal stability and provides steric shielding that can improve reproducibility of functionalization density across batches. Hydroxy-PEG7-DBCO is also used to generate functional coatings and linker systems for building block assembly, including patterned labeling of hydrogels and PEG-based matrices that require aqueous compatibility and robust SPAAC coupling.
3. Molecular Imaging Probe Assembly
Hydroxy-PEG7-DBCO is commonly selected for constructing imaging and detection probes where a hydrophilic PEG spacer is needed to manage probe solubility and reduce aggregation of conjugates. Probe developers use Hydroxy-PEG7-DBCO as a DBCO-bearing intermediate to couple imaging reporters or affinity ligands that have been functionalized with azide groups, enabling rapid, modular synthesis of multi-component probe sets. The SPAAC-compatible nature of Hydroxy-PEG7-DBCO fits workflows in which labeling chemistry must proceed under mild, aqueous conditions while maintaining the integrity of sensitive reporter conjugates.
4. Diagnostic Reagent Development
Hydroxy-PEG7-DBCO is used to prepare azide-reactive components for diagnostic reagent platforms that rely on modular conjugation strategies. Reagent developers incorporate Hydroxy-PEG7-DBCO into linker architectures for assembling assay reagents, such as conjugates used in signal generation and capture formats, by coupling to azide-functional binding partners or assay components. The PEG7 spacer provides a practical handle for tuning the effective distance between the binding element and the reactive click site, supporting consistent reagent performance across multiplexed or sequential assay assembly workflows.
Computed Properties
| XLogP3 | 0.3 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 10 |
| Rotatable Bond Count | 26 |
| Exact Mass | 656.33089573 g/mol |
| Monoisotopic Mass | 656.33089573 g/mol |
| Topological Polar Surface Area | 134Ų |
| Heavy Atom Count | 47 |
| Formal Charge | 0 |
| Complexity | 909 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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