
Fluorescein | CAS 2321-07-5
| Catalog Number | F04-0037 |
| Category | Fluorescein FAM |
| Molecular Formula | C20H12O5 |
| Molecular Weight | 332.31 |
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Product Introduction
Fluorescein is a synthetic fluorescent tracer, used in ophthalmology as a tool in the diagnosis of corneal abrasions, corneal ulcers and herpetic corneal infections.
Chemical Information
Product Specification
Application
QC Data
Computed Properties
Literatures
Patents
Chemical Information
| Related CAS | 518-47-8 (disodium salt) |
| Synonyms | 3',6'-dihydroxyspiro[2-benzofuran-3,9'-xanthene]-1-one; C.I. 45350; Colircusi Fluoresceina; D and C Yellow No. 7; D and C Yellow No. 8; Diofluor; Dipotassium Salt, Fluorescein; Disodium Fluorescein; Disodium Salt, Fluorescein; Fluor I Strip A.T.; Fluor-I-Strip A.T.; Fluorescéine sodique Faure; Fluorescein; Fluorescein Dipotassium Salt; Fluorescein Disodium Salt; Fluorescein Monosodium Salt; Fluorescein Sodium; Fluorescein Sodium, Minims; Fluorescein, Disodium; Fluorescein, Sodium; Fluoresceina, Colircusi; Fluoresceine, Minims; Fluorescite; Fluorets; Ful Glo; Ful-Glo; Funduscein; Minims Fluorescein Sodium; Minims Fluoresceine; Minims Stains; Monosodium Salt, Fluorescein; Optifluor Diba; Sodium Fluorescein; Sodium, Fluorescein; Uranine |
| Purity | ≥90% |
| IUPAC Name | 3',6'-dihydroxyspiro[2-benzofuran-3,9'-xanthene]-1-one |
| SMILES | C1=CC=C2C(=C1)C(=O)OC23C4=C(C=C(C=C4)O)OC5=C3C=CC(=C5)O |
| InChI | 1S/C20H12O5/c21-11-5-7-15-17(9-11)24-18-10-12(22)6-8-16(18)20(15)14-4-2-1-3-13(14)19(23)25-20/h1-10,21-22H |
| InChIKey | GNBHRKFJIUUOQI-UHFFFAOYSA-N |
| Solubility | Soluble in DMSO (Slightly), Methanol (Slightly) |
| Density | 1.60±0.1 g/cm3 |
| Appearance | Brown to Dark Red Solid |
| Refractive Index | 1.46355 |
| Boiling Point | 620.8±55.0 °C at 760 Torr |
| Melting Point | 315 °C (decomp) |
| MDL Number | MFCD00005050 |
| Vapor Pressure | 4.1X10-14 mm Hg at 25 °C (est) |
| LogP | 3.4 |
Product Specification
| Maximum Absorption Wavelength | 490(0.1mol/L NaOH sol.) nm |
| Storage | Cool and dry place, sealed. |
| Signal | Warning |
| GHSHazardStatements | H302 (13.82%): Harmful if swallowed [Warning Acute toxicity, oral] H319 (100%): Causes serious eye irritation [Warning Serious eye damage/eye irritation] |
| Precautionary Statement Codes | P264, P264+P265, P270, P280, P301+P317, P305+P351+P338, P330, P337+P317, and P501 (The corresponding statement to each P-code can be found at the GHS Classification page.) |
Application
Fluorescein is a widely used fluorescein-class fluorophore known for strong green fluorescence and straightforward conjugation to biomolecules and materials through common reactive handles. In fluorescence labeling workflows, it serves as a practical reporter for microscopy and plate-based assays, where its emission is readily detected with standard visible-light filter sets. Because fluorescein is frequently incorporated into labeled probes and conjugates, it is also a common component in assay development and fluorescence quantification experiments.
1. Fluorescence Microscopy Labeling
Fluorescein is used as a fluorescent labeling reporter in cellular and biomolecular imaging workflows, including staining of fixed specimens and labeling of purified targets for fluorescence microscopy. Researchers incorporate fluorescein into antibody conjugates, lectin conjugates, and other affinity reagents to visualize binding patterns on cells, extracellular matrices, or immobilized biomolecules. In imaging studies, its bright visible emission enables convenient detection with common microscope filter sets, supporting qualitative localization and comparative signal readouts across experimental conditions.
2. Flow Cytometry Fluorescent Tagging
Fluorescein is frequently selected for flow cytometry experiments that require a bright green fluorescence tag for labeled cells or bead-based standards. In typical workflows, it is incorporated into antibody conjugates, secondary reagents, or labeling reagents used to quantify binding to cell-surface targets or to track labeled populations in suspension. Because fluorescein signals are readily measured on many benchtop cytometers equipped with appropriate excitation/emission optics, it is commonly used for routine fluorescence-based characterization and multiplex panel development where green-channel reporters are needed.
3. Fluorescence Bioassay Reporter
Fluorescein is widely applied as a fluorescence reporter in plate-based bioassays and binding assays, where it supports quantitative monitoring of reagent binding, wash steps, or assay progress through changes in emitted intensity. Assay developers use fluorescein-labeled biomolecules to construct detection reagents for immunoassays, nucleic acid-related fluorescence formats, and other fluorescence readouts that rely on green emission. Its compatibility with standard microplate fluorescence instrumentation makes it a practical choice for method development, reagent screening, and routine assay optimization in research laboratories.
4. Fluorescent Standards And Tracing
Fluorescein is also used to prepare fluorescent standards and tracing reagents for instrument checks, calibration experiments, and workflow controls. In microscopy and spectroscopy settings, it can serve as a convenient reference fluorophore for verifying excitation/emission settings and monitoring day-to-day instrument stability. In materials and biomaterials research, fluorescein-containing labeling reagents are used to visualize transport, distribution, or incorporation of fluorescently tagged components within hydrogels, coatings, and surface-modified platforms, supporting comparative studies of labeling density and spatial distribution.
QC Data
Computed Properties
| XLogP3 | 3.4 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 5 |
| Rotatable Bond Count | 0 |
| Exact Mass | 332.06847348 g/mol |
| Monoisotopic Mass | 332.06847348 g/mol |
| Topological Polar Surface Area | 76Ų |
| Heavy Atom Count | 25 |
| Formal Charge | 0 |
| Complexity | 522 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Literatures
| PMID | Publication Date | Title | Journal |
|---|---|---|---|
| 36870414 | 2023-04-01 | Comparison of adjuvant mechanisms of medium-chain triacylglycerol in a mouse FITC-induced contact hypersensitivity model | Toxicology |
| 28551711 | 2017-12-01 | Why are most phospholipidosis inducers also hERG blockers? | Archives of toxicology |
| 28887287 | 2017-12-01 | Characterization of simvastatin acid uptake by organic anion transporting polypeptide 3A1 (OATP3A1) and influence of drug-drug interaction | Toxicology in vitro : an international journal published in association with BIBRA |
| 28729014 | 2017-11-01 | Evaluating ureteral patency in the post-indigo carmine era: a randomized controlled trial | American journal of obstetrics and gynecology |
| 27989701 | 2017-04-01 | Inhibition of SLC drug transporter activities by environmental bisphenols | Toxicology in vitro : an international journal published in association with BIBRA |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| WO-2022078524-A2 | Specific conjugation of an antibody | 2021-11-03 |
| WO-2022078524-A4 | Specific conjugation of an antibody | 2021-11-03 |
| US-11331322-B1 | Medicament for preventing and/or treating dry eye | 2021-09-15 |
| US-11535900-B1 | Methods and systems for analysis of samples containing particles used for gene delivery | 2021-09-03 |
| US-2022411856-A1 | Compact optical high-speed system for nucleic acid amplification and detection | 2021-06-29 |
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