
DBCO-SS-amine
| Catalog Number | R01-0279 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C23H25N3O2S2 |
| Molecular Weight | 439.59 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
DBCO-SS-amine is a bifunctional cleavable ADC linker with DBCO and amine groups linked by a disulfide bond, enabling site-specific click chemistry and stable payload attachment.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | ≥95% |
| Shelf Life | 0-4°C for short term (days to weeks), or -20°C for long term (months). |
| IUPAC Name | |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCC(=O)NCCSSCCN |
| InChI | InChI=1S/C23H25N3O2S2/c24-13-15-29-30-16-14-25-22(27)11-12-23(28)26-17-20-7-2-1-5-18(20)9-10-19-6-3-4-8-21(19)26/h1-8H,11-17,24H2,(H,25,27) |
| InChIKey | CZMYTLNFEACBDG-UHFFFAOYSA-N |
| Solubility | 10 mm in DMSO |
| Appearance | white foam |
Product Specification
| Storage | Store at -20 °C, keep in dry and avoid sunlight. |
Application
DBCO-SS-amine is a strained cyclooctyne (DBCO) click chemistry reagent designed for copper-free strain-promoted azide–alkyne cycloaddition (SPAAC) and commonly used as a functional amine handle for downstream conjugation workflows. The molecule incorporates a DBCO cyclooctyne core for rapid reaction with azide-bearing partners and a disulfide-containing linker that can support redox-responsive release or cleavage in reducing environments. This combination makes DBCO-SS-amine a practical building block for preparing azide-functional probes, biomaterials, and imaging reagents where modular attachment and controlled linker behavior are valuable.
1. Redox-Responsive Linker Conjugates
DBCO-SS-amine is frequently used to assemble conjugates that incorporate a disulfide linkage between the DBCO-reactive moiety and an amine-functional payload. Researchers in chemical biology and biomaterials use this design to create constructs where the attachment can be maintained during handling and processing, then cleaved under reducing conditions to enable payload liberation or linker remodeling. The amine functionality supports further derivatization into labeled, affinity, or capture-ready materials, while the DBCO group enables efficient SPAAC coupling to azide-functional targets such as polymers, nanoparticles, or biomolecular scaffolds.
2. Biomolecule Labeling and Tagging
DBCO-SS-amine is well suited for labeling workflows that require site-specific attachment of an amine-bearing handle to azide-tagged biomolecules. In molecular imaging and diagnostic reagent development, the reagent is used to introduce a DBCO-reactive group that can be clicked onto azide-functional antibodies, peptides, aptamers, or protein fragments, followed by utilization of the amine for additional coupling steps (e.g., secondary conjugations to dyes, affinity ligands, or capture surfaces). The disulfide linker provides an additional design element for constructing multi-step conjugation schemes where controlled cleavage can be leveraged to improve release of labeled fragments during assay preparation or sample processing.
3. Surface Functionalization of Materials
DBCO-SS-amine is commonly applied to functionalize azide-derivatized surfaces and materials, including polymer films, hydrogel networks, and bead-based platforms used in research and industrial R&D. The SPAAC-compatible DBCO group enables straightforward attachment to azide-presenting substrates without copper catalysts, which is advantageous for sensitive materials and for workflows that prioritize operational simplicity. Once immobilized, the amine functionality can be used to further grow or pattern functional layers, while the disulfide-containing linker offers a tunable handle for post-processing or controlled detachment strategies in downstream applications such as probe recovery, surface regeneration, or modular reconfiguration of material functionality.
4. Multi-Step Probe and Assay Building
DBCO-SS-amine is frequently incorporated as an intermediate reagent in multi-step construction of click-ready probes and assay reagents, where a DBCO group is needed for SPAAC attachment and an amine is required for subsequent conjugation chemistry. Chemical biology teams use it to connect azide-functional components into larger assemblies, such as multi-ligand imaging probes, affinity-tagged detection reagents, or modular reagent libraries that can be diversified after initial coupling. The disulfide linker supports design strategies that separate assembly from later release or exchange steps, enabling practical control over how probe components are presented during preparation and use in analytical workflows.
Computed Properties
| XLogP3 | 1.8 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 5 |
| Rotatable Bond Count | 9 |
| Exact Mass | 439.13881940 g/mol |
| Monoisotopic Mass | 439.13881940 g/mol |
| Topological Polar Surface Area | 126Ų |
| Heavy Atom Count | 30 |
| Formal Charge | 0 |
| Complexity | 645 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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