
DBCO-SS-aldehyde
| Catalog Number | R01-0277 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C28H27N3O6S2 |
| Molecular Weight | 565.66 |
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Product Introduction
DBCO-SS-aldehyde is a cleavable ADC linker containing DBCO for strain-promoted click chemistry and aldehyde for oxime ligation, supporting versatile and stable antibody-drug conjugate synthesis.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | ≥95% |
| Shelf Life | ≥ 2 years |
| IUPAC Name | |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCNC(=O)CCSSCCNC(=O)C4=CC=C(C=C4)C=O |
| InChI | InChI=1S/C31H29N3O4S2/c35-22-23-9-11-26(12-10-23)31(38)33-18-20-40-39-19-16-29(36)32-17-15-30(37)34-21-27-7-2-1-5-24(27)13-14-25-6-3-4-8-28(25)34/h1-12,22H,15-21H2,(H,32,36)(H,33,38) |
| InChIKey | RQSKTIYFMRQDRL-UHFFFAOYSA-N |
| Solubility | 10 mm in DMSO |
| Appearance | white foam |
Product Specification
| Storage | Store at -20 °C, keep in dry and avoid sunlight. |
Application
DBCO-SS-aldehyde is a strained cyclooctyne (DBCO) click chemistry reagent bearing an aldehyde functionality and a disulfide-containing linker, enabling modular conjugation strategies in chemical biology and materials research. As a DBCO-based reagent, it is commonly used for copper-free strain-promoted azide–alkyne cycloaddition (SPAAC) to attach biomolecules or polymers that carry azide groups. The aldehyde handle broadens downstream reactivity for forming reversible or covalent adducts with nucleophilic partners, while the disulfide motif supports redox-responsive behaviors in probe and material design.
1. Redox-Responsive Probe Conjugation
DBCO-SS-aldehyde is used to build redox-responsive chemical probes where a disulfide linker provides a chemically addressable element for controlled cleavage or environment-dependent behavior. Researchers often incorporate the DBCO group to rapidly label azide-functional targets via copper-free click chemistry, then use the aldehyde functionality to install additional recognition elements, affinity tags, or secondary reporters through aldehyde-compatible coupling workflows. This combination is particularly valuable in workflows that require orthogonal handles: one for SPAAC-based attachment to an azide-bearing scaffold and another for subsequent derivatization to generate multicomponent imaging or assay reagents.
2. Multihandle Biomolecule Labeling
DBCO-SS-aldehyde supports multihandle labeling of biomolecules and biomolecule-derived assemblies, where the DBCO moiety enables efficient attachment to azide-functional proteins, peptides, glycans, or nucleic-acid conjugates. After click attachment, the aldehyde group provides a convenient chemical handle for further functionalization, enabling researchers to tune probe density, introduce capture moieties, or prepare conjugates for downstream analytical workflows. The disulfide-containing linkage is frequently leveraged in experimental designs that benefit from reversible or stimulus-responsive conjugate architectures, such as transient reagent formats used during imaging development or biochemical characterization.
3. Surface and Material Functionalization
DBCO-SS-aldehyde is applied in biomaterials science and interface engineering to functionalize surfaces or polymeric materials that present azide groups, including azide-modified hydrogels, coatings, and nanoparticle platforms. The DBCO functionality allows rapid, copper-free coupling to immobilize aldehyde-bearing linkers onto the material, providing a site for subsequent aldehyde-directed chemistry to attach polymers, crosslinkers, or affinity ligands. By integrating a disulfide motif into the tether, DBCO-SS-aldehyde also fits material designs that aim for controllable release or remodeling under defined chemical environments, supporting iterative optimization of functional coatings and diagnostic-reagent surfaces.
4. Diagnostic Reagent and Assay Development
DBCO-SS-aldehyde is used in the development of diagnostic reagent building blocks where modular conjugation is required to assemble complex assay components from azide-functional intermediates. The reagent’s DBCO enables SPAAC-based installation onto azide-bearing carriers such as labeled biomolecule constructs, affinity reagents, or assay scaffolds, while the aldehyde handle provides an additional functional group for creating multivalent formats or integrating secondary detection elements. In many assay-development pipelines, the disulfide linker is selected to provide a chemical “switch” that can alter conjugate stability or accessibility during reagent preparation and handling, supporting robust manufacturing-style workflows for research diagnostic reagents.
Computed Properties
| XLogP3 | 3.2 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 6 |
| Rotatable Bond Count | 12 |
| Exact Mass | 571.15994876 g/mol |
| Monoisotopic Mass | 571.15994876 g/mol |
| Topological Polar Surface Area | 146Ų |
| Heavy Atom Count | 40 |
| Formal Charge | 0 |
| Complexity | 939 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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