
DBCO-PEG5-acid | CAS 1870899-46-9
| Catalog Number | R01-0411 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C32H40N2O9 |
| Molecular Weight | 596.67 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
DBCO-PEG5-acid is a DBCO-terminated PEG linker ideal for azide-reactive SPAAC conjugation in antibody-drug conjugates. It supports site-specific, copper-free click chemistry, enhancing payload attachment and maintaining ADC stability in physiological environments.
Chemical Information
Product Specification
Application
Computed Properties
Patents
Chemical Information
| Synonyms | DBCO-NHCO-PEG4-acid; 3-[2-[2-[2-[2-[3-[[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]amino]-3-oxopropoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid; DBCO-Amide-PEG5-acid |
| Purity | >98.0% |
| Shelf Life | ≥ 2 years |
| IUPAC Name | 3-[2-[2-[2-[2-[3-[[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]amino]-3-oxopropoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCNC(=O)CCOCCOCCOCCOCCOCCC(=O)O |
| InChI | InChI=1S/C32H40N2O9/c35-30(12-15-39-17-19-41-21-23-43-24-22-42-20-18-40-16-13-32(37)38)33-14-11-31(36)34-25-28-7-2-1-5-26(28)9-10-27-6-3-4-8-29(27)34/h1-8H,11-25H2,(H,33,35)(H,37,38) |
| InChIKey | IBWIRDQMNBYUPH-UHFFFAOYSA-N |
| Solubility | 10 mm in DMSO |
| Appearance | Solid |
Product Specification
| Storage | Store at -5°C,keep in dry and avoid sunlight. |
Application
DBCO-PEG5-acid is a cyclooctyne (DBCO) functionalized polyethylene glycol carboxylic acid designed for strain-promoted azide–alkyne cycloaddition (SPAAC) in bioconjugation workflows. The PEG spacer improves aqueous solubility and helps reduce steric constraints between the reactive DBCO group and target biomolecules, surfaces, or polymer backbones. As a click-ready linker, DBCO-PEG5-acid is commonly used to introduce DBCO handles into materials and probes that are subsequently coupled to azide-bearing partners under copper-free conditions.
1. Protein And Antibody Labeling
DBCO-PEG5-acid is widely used to generate DBCO-functional protein conjugates for downstream azide-reactive labeling strategies. Researchers commonly incorporate the PEG carboxylate functionality for coupling to amine-bearing targets or for attachment to activated linkers, enabling controlled placement of the cyclooctyne handle away from the biomolecule surface. This approach supports preparation of fluorescent conjugates, affinity reagents, and multi-component labeling constructs where the PEG spacer helps maintain binding-site accessibility and reduces nonspecific crowding effects during probe assembly.
2. Surface Coatings And Biomaterials
DBCO-PEG5-acid is used to functionalize biomaterial surfaces, polymer films, and scaffold materials with SPAAC-reactive DBCO groups for subsequent immobilization of azide-tagged biomolecules. The PEG5-acid format is particularly relevant in materials engineering because it provides a convenient handle for tethering to surfaces while maintaining water compatibility and minimizing steric hindrance at the interface. Such DBCO-functional coatings are frequently employed to build modular biointerfaces, including enzyme or peptide immobilization platforms, affinity capture surfaces, and cell-interaction materials where azide-bearing ligands are introduced by click coupling.
3. PEG Linker For Nanoparticles
DBCO-PEG5-acid serves as a practical PEG-based linker for decorating nanoparticles and colloidal carriers with cyclooctyne functionality prior to azide-mediated assembly. In nanomaterials workflows, the PEG spacer helps improve colloidal stability and reduces aggregation by providing a hydrated layer around the particle, while the carboxylic acid enables attachment to polymer shells, surface-reactive chemistries, or linker systems used in nanoparticle functionalization. This makes DBCO-PEG5-acid a common reagent for constructing multivalent nanoparticle probes and modular nanoparticle conjugates that rely on azide handles for controlled surface customization.
4. Molecular Imaging Probe Building
DBCO-PEG5-acid is frequently selected for assembling imaging and detection probes through copper-free SPAAC coupling to azide-bearing reporters, targeting motifs, or signal-generating components. The PEG5 spacer supports flexible presentation of the DBCO group, which can be important when conjugating bulky ligands or when minimizing steric interference between the probe components. By enabling modular “click-to-build” workflows, DBCO-PEG5-acid helps researchers generate multi-component probe architectures for fluorescence-based assays, imaging reagent development, and analytical reagent construction where reproducible conjugation and component interchangeability are valuable.
Computed Properties
| XLogP3 | 0.8 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 9 |
| Rotatable Bond Count | 21 |
| Exact Mass | 596.27338086 g/mol |
| Monoisotopic Mass | 596.27338086 g/mol |
| Topological Polar Surface Area | 133Ų |
| Heavy Atom Count | 43 |
| Formal Charge | 0 |
| Complexity | 902 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| WO-2022155257-A1 | Systems, apparatuses, and methods for cellular therapeutics manufacture | 2021-01-12 |
| WO-2022125874-A2 | Methods for identification of exchangeable mhc binding peptides and methods of use thereof | 2020-12-11 |
| TW-202039008-A | Adcs with thiol multiplex linkers | 2018-12-21 |
| AU-2019403552-A1 | ADCs with thiol multiplex linkers | 2018-12-21 |
| CA-3122316-A1 | Adcs with thiol multiplex linkers | 2018-12-21 |
Recommended Services
Recommended Articles
- Hoechst Dyes: Definition, Structure, Mechanism and Applications
- Mastering the Spectrum: A Comprehensive Guide to Cy3 and Cy5 Dyes
- Fluorescent Probes: Definition, Structure, Types and Application
- Fluorescent Dyes: Definition, Mechanism, Types and Application
- Coumarin Dyes: Definition, Structure, Benefits, Synthesis and Uses
- Unlocking the Power of Fluorescence Imaging: A Comprehensive Guide
- Cell Imaging: Definitions, Systems, Protocols, Dyes, and Applications
- Lipid Staining: Definition, Principles, Methods, Dyes, and Uses
- Flow Cytometry: Definition, Principles, Protocols, Dyes, and Uses
- Nucleic Acid Staining: Definition, Principles, Dyes, Procedures, and Uses
Recommended Products
Online Inquiry