
DBCO-PEG12-acid
| Catalog Number | R01-0295 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C₄₆H₆₈N₂O₁₆ |
| Molecular Weight | 905.04 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
DBCO-PEG12-acid is a polyethylene glycol (PEG)-based PROTAC linker. DBCO-PEG12-acid can be used in the synthesis of a series of PROTACs.
Chemical Information
Product Specification
Application
Computed Properties
Patents
Chemical Information
| Purity | >95% |
| IUPAC Name | 3-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[[4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-4-oxobutanoyl]amino]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoic acid |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCC(=O)NCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCC(=O)O |
| InChI | InChI=1S/C46H68N2O16/c49-44(11-12-45(50)48-39-42-7-2-1-5-40(42)9-10-41-6-3-4-8-43(41)48)47-14-16-54-18-20-56-22-24-58-26-28-60-30-32-62-34-36-64-38-37-63-35-33-61-31-29-59-27-25-57-23-21-55-19-17-53-15-13-46(51)52/h1-8H,11-39H2,(H,47,49)(H,51,52) |
| InChIKey | JTMLLRMZFUPHIS-UHFFFAOYSA-N |
| Solubility | DCM, THF, acetonitrile, DMF and DMSO |
| Appearance | Yellow oil |
Product Specification
| Storage | Please store the product under the recommended conditions in the Certificate of Analysis. |
Application
DBCO-PEG12-acid is a dibenzocyclooctyne (DBCO) functionalized, PEG-based carboxylic acid designed for strain-promoted azide–alkyne cycloaddition (SPAAC) in click chemistry workflows. The extended PEG spacer improves solubility and reduces nonspecific interactions, while the terminal acid enables straightforward conjugation to amine-containing biomolecules, polymer backbones, or activated surfaces. As a widely used DBCO building block, it supports modular bioconjugation and material labeling strategies where rapid, catalyst-free coupling to azide-bearing targets is required.
1. Protein And Peptide Labeling
DBCO-PEG12-acid is used to install DBCO handles on proteins and peptides for subsequent SPAAC coupling to azide-functional probes, affinity tags, or imaging reagents. The PEG12 spacer helps maintain accessibility of the cyclooctyne moiety and can reduce steric hindrance during labeling, which is particularly valuable for larger biomolecules or densely functionalized conjugates. The carboxylic acid functionality also supports common downstream attachment strategies to amine-rich biomaterials, enabling reproducible preparation of azide-reactive bioconjugates for biochemical assays and molecular imaging development.
2. Surface And Material Functionalization
DBCO-PEG12-acid is well suited for functionalizing polymeric and solid supports where azide-bearing ligands, nanoparticles, or coatings are introduced through click coupling. The PEG chain promotes wetting and reduces aggregation on hydrophilic surfaces, improving the uniformity of DBCO presentation and facilitating consistent conjugation density. The terminal acid enables attachment to activated surfaces and polymer scaffolds, supporting workflows such as creating azide-reactive material platforms, building responsive coatings, and preparing modular interfaces for research-grade diagnostics reagent development.
3. Nanoparticle And Liposome Conjugation
DBCO-PEG12-acid is frequently employed in nanoparticle and liposome labeling pipelines to create stable DBCO-functional carriers that can be coupled to azide-modified imaging or targeting components. The PEG spacer supports colloidal stability and helps maintain particle compatibility during conjugation and storage, while the carboxylic acid provides a practical handle for incorporation into lipid or polymer assemblies using standard surface chemistry approaches. This makes DBCO-PEG12-acid a common choice for constructing multicomponent nanoparticle probes and platform materials where controlled, modular assembly via SPAAC is required.
4. Diagnostic Probe And Assay Reagent Building
DBCO-PEG12-acid is used as a modular reagent to generate DBCO-bearing intermediates for diagnostic and analytical assay development, including labeling of affinity reagents and preparation of multivalent detection constructs. By introducing DBCO through PEG-mediated spacing, researchers can improve accessibility of the reactive group for subsequent coupling to azide-tagged reporters, enabling streamlined synthesis of complex probe architectures. The carboxylic acid group supports integration into reagent formats such as polymer conjugates or activated capture surfaces, facilitating scalable workflows for producing clickable assay components used in research and industrial R&D settings.
Computed Properties
| XLogP3 | -0.2 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 16 |
| Rotatable Bond Count | 42 |
| Exact Mass | 904.45688409 g/mol |
| Monoisotopic Mass | 904.45688409 g/mol |
| Topological Polar Surface Area | 198Ų |
| Heavy Atom Count | 64 |
| Formal Charge | 0 |
| Complexity | 1250 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| US-2022096648-A1 | Antibody-drug conjugates comprising glp1 peptidomimetics and uses thereof | 2020-09-14 |
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