
DBCO-C2-PEG4-amine
| Catalog Number | R01-0395 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C₃₂H₄₁N₃O₈ |
| Molecular Weight | 595.68 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
DBCO-C2-PEG4-amine is a polyethylene glycol (PEG)-based PROTAC linker. DBCO-C2-PEG4-amine can be used in the synthesis of a series of PROTACs.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 98% |
| IUPAC Name | 2-[[4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-4-oxobutanoyl]amino]ethyl 3-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]propanoate |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCC(=O)NCCOC(=O)CCOCCOCCOCCOCCN |
| InChI | InChI=1S/C32H41N3O8/c33-14-17-40-20-22-42-24-23-41-21-19-39-16-13-32(38)43-18-15-34-30(36)11-12-31(37)35-25-28-7-2-1-5-26(28)9-10-27-6-3-4-8-29(27)35/h1-8H,11-25,33H2,(H,34,36) |
| InChIKey | RIRGWQMNOCGPGW-UHFFFAOYSA-N |
| Solubility | DMSO, DCM, DMF |
Product Specification
| Storage | Please store the product under the recommended conditions in the Certificate of Analysis. |
Application
DBCO-C2-PEG4-amine is a dibenzocyclooctyne (DBCO) functionalized, PEGylated primary amine reagent designed for strain-promoted azide–alkyne cycloaddition (SPAAC) click chemistry. The C2 linker and PEG4 spacer provide aqueous compatibility and tunable distance between the reactive DBCO group and the amine handle, enabling robust conjugation workflows for biomolecule and material functionalization. As a click-ready building block, it is commonly used to introduce a SPAAC-reactive DBCO moiety while retaining an amine for subsequent coupling to targeting ligands, polymers, or solid supports.
1. Protein And Peptide Conjugation
DBCO-C2-PEG4-amine is widely used to prepare azide-bearing protein and peptide conjugates for labeling, affinity reagents, and multicomponent bioconjugates in chemical biology laboratories. The PEG4 spacer helps reduce steric congestion around the DBCO group, supporting efficient SPAAC coupling to azide-functional biomolecules such as azide-tagged antibodies, enzyme constructs, or peptide libraries. The terminal amine further enables orthogonal downstream attachment to activated esters, isothiocyanates, or NHS-chemistry handles used in probe and carrier assembly, making the reagent a practical choice for building modular bioconjugation pipelines.
2. Surface And Bead Functionalization
DBCO-C2-PEG4-amine supports immobilization of SPAAC-reactive surfaces and solid-phase formats used in screening, capture assays, and analytical workflows. The amine functionality enables coupling to carboxyl-activated resins, NHS-activated surfaces, or amine-reactive coatings, while the DBCO group provides a stable, catalyst-free click handle for subsequent reaction with azide-modified targets. This combination is particularly valuable for constructing azide-to-surface labeling strategies on beads, sensor chips, and microarray platforms where controlled spacing and improved accessibility can influence binding uniformity and signal generation.
3. Polymer And Hydrogel Crosslinking
DBCO-C2-PEG4-amine is commonly incorporated into polymer and hydrogel design to enable SPAAC-based network formation or post-gel functionalization with azide-functional crosslinkers and biomolecule payloads. The PEG4 segment contributes to hydrophilicity and helps maintain colloidal stability during formulation, while the primary amine can be used to integrate the reagent into polymer backbones or to introduce reactive sites for additional chemistry. In materials research, this reagent is used to create clickable, modular matrices that can be functionalized with azide-bearing ligands, imaging tags, or responsive motifs after initial gelation or coating steps.
4. Molecular Imaging Probe Assembly
DBCO-C2-PEG4-amine is used as a DBCO-bearing linker for assembling azide-functional imaging probes and fluorescent or luminescent conjugates in molecular imaging and diagnostics reagent development. The PEG4 spacer is beneficial for improving probe solubility and reducing non-specific interactions, while the amine provides a convenient handle for coupling to dye scaffolds, chelator-bearing groups, or carrier molecules used in probe formulation. By enabling SPAAC attachment to azide-tagged reporters under mild conditions, the reagent fits workflows that require reliable, modular construction of multi-component imaging reagents for research instrumentation and assay development.
Computed Properties
| XLogP3 | 0.3 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 9 |
| Rotatable Bond Count | 21 |
| Exact Mass | 595.28936527 g/mol |
| Monoisotopic Mass | 595.28936527 g/mol |
| Topological Polar Surface Area | 139Ų |
| Heavy Atom Count | 43 |
| Formal Charge | 0 |
| Complexity | 904 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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