Cyanine5.5 DBCO

What We Offer

Cyanine5.5 DBCO

Cyanine5.5 DBCO

Catelog Number R09-0006
Category Cycloalkyne Dyes (DBCO)
Molecular Formula C61H63N4F6O2P
Molecular Weight 1029.14
Catalog Number Size Price Quantity
R09-0006 -- $--

Product Introduction

Strain promoted alkyne azide cycloaddition (spAAc) between strained cycloalkynes and azides is a useful bioconjugation method that eliminates the need for copper catalyst necessary for classical CuAAc Click chemistry.

Chemical Information

Purity NMR 1H, HPLC-MS (95%)
IUPAC Name N-[6-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-6-oxohexyl]-6-[1,1-dimethyl-2-[5-(1,1,3-trimethylbenzo[e]indol-3-ium-2-yl)penta-2,4-dienylidene]benzo[e]indol-3-yl]hexanamide;hexafluorophosphate
Canonical SMILES CC1(C(=[N+](C2=C1C3=CC=CC=C3C=C2)C)C=CC=CC=C4C(C5=C(N4CCCCCC(=O)NCCCCCC(=O)N6CC7=CC=CC=C7C#CC8=CC=CC=C86)C=CC9=CC=CC=C95)(C)C)C.F[P-](F)(F)(F)(F)F
InChI InChI=1S/C61H62N4O2.F6P/c1-60(2)54(63(5)52-39-37-45-24-15-18-28-49(45)58(52)60)31-9-6-10-32-55-61(3,4)59-50-29-19-16-25-46(50)38-40-53(59)64(55)42-22-8-11-33-56(66)62-41-21-7-12-34-57(67)65-43-48-27-14-13-23-44(48)35-36-47-26-17-20-30-51(47)65;1-7(2,3,4,5)6/h6,9-10,13-20,23-32,37-40H,7-8,11-12,21-22,33-34,41-43H2,1-5H3;/q;-1/p+1
InChI Key CICHRHLVMUNIGJ-UHFFFAOYSA-O
Solubility good in DMF, DMSO, chlorinated organic solvents
Appearance dark colored solid

Product Specification

ε, L⋅mol-1⋅cm-1 198000
Fluorescence Quantum Yield 0.2
Excitation 684
Emission 710
Storage 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

Hydrogen Bond Donor Count 1
Hydrogen Bond Acceptor Count 10
Rotatable Bond Count 15
Exact Mass 1028.45928324 g/mol
Monoisotopic Mass 1028.45928324 g/mol
Topological Polar Surface Area 55.7Ų
Heavy Atom Count 74
Formal Charge 0
Complexity 1990
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 3
Covalently-Bonded Unit Count 2
Compound Is Canonicalized Yes
cartIcon
Inquiry Basket