.gif)
Propane-1,2,3-(PEG11-DBCO)
| Catalog Number | R01-0321 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C132H194N6O42 |
| Molecular Weight | 2537.0 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Propane-1,2,3-(PEG11-DBCO) is a specialized reagent featuring a dibenzocyclooctyne (DBCO) moiety linked through an 11-unit polyethylene glycol (PEG) spacer to a propane backbone. This molecular architecture facilitates strain-promoted azide-alkyne cycloaddition reactions, allowing for bioorthogonal conjugation without the need for copper catalysts. The PEG linker enhances solubility and flexibility, making it suitable for applications in biomolecule conjugation, surface modification, and polymer functionalization.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 98% |
| IUPAC Name | 4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-N-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2,3-bis[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[[4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-4-oxobutanoyl]amino]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-4-oxobutanamide |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCC(=O)NCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCC(COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCC(=O)N4CC5=CC=CC=C5C#CC6=CC=CC=C64)OCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCC(=O)N7CC8=CC=CC=C8C#CC9=CC=CC=C97 |
| InChI | InChI=1S/C132H194N6O42/c139-127(31-34-130(142)136-109-120-19-4-1-13-114(120)25-28-117-16-7-10-22-124(117)136)133-37-40-145-43-46-148-49-52-151-55-58-154-61-64-157-67-70-160-73-75-163-79-81-166-85-87-169-91-93-172-97-99-175-103-105-178-112-123(180-108-107-177-102-101-174-96-95-171-90-89-168-84-83-165-78-77-162-72-69-159-66-63-156-60-57-153-54-51-150-48-45-147-42-39-135-129(141)33-36-132(144)138-111-122-21-6-3-15-116(122)27-30-119-18-9-12-24-126(119)138)113-179-106-104-176-100-98-173-94-92-170-88-86-167-82-80-164-76-74-161-71-68-158-65-62-155-59-56-152-53-50-149-47-44-146-41-38-134-128(140)32-35-131(143)137-110-121-20-5-2-14-115(121)26-29-118-17-8-11-23-125(118)137/h1-24,123H,31-113H2,(H,133,139)(H,134,140)(H,135,141) |
| InChIKey | LGHOVHRXLAKLME-UHFFFAOYSA-N |
| Solubility | DMSO, DCM, DMF |
Product Specification
| Storage | -20 °C |
Application
Propane-1,2,3-(PEG11-DBCO) is a PEGylated DBCO (dibenzocyclooctyne) click chemistry reagent designed for strain-promoted azide–alkyne cycloaddition (SPAAC) without copper catalysis. The three-carbon scaffold bearing a long PEG11 spacer positions the reactive DBCO group for efficient conjugation while improving solubility and reducing nonspecific interactions. This reagent is commonly used in bioconjugation workflows where stable, bioorthogonal labeling of azide-functional targets is required for probe, material, and imaging reagent development.
1. Bioconjugation Labeling
Propane-1,2,3-(PEG11-DBCO) is widely used to attach DBCO handles to azide-bearing biomolecules such as proteins, peptides, and nucleic-acid constructs, enabling streamlined assembly of multicomponent labeling reagents. The PEG11 spacer helps maintain conjugate solubility and can reduce steric constraints that otherwise limit SPAAC coupling, which is particularly valuable when labeling complex biomolecular surfaces. Researchers and platform teams use this reagent to generate defined conjugates for downstream assay development, including fluorescent or affinity-tagged constructs prepared for analytical workflows and target-binding studies.
2. Molecular Imaging Probes
Propane-1,2,3-(PEG11-DBCO) supports the preparation of azide-functional imaging probes by providing a SPAAC-compatible DBCO moiety that can be coupled under mild, catalyst-free conditions. The PEG11 linker is often leveraged to improve probe handling in aqueous buffers and to help maintain favorable probe distribution in labeling mixtures, which is important for reproducible probe synthesis at the research scale. Imaging reagent developers use this chemistry to build modular probe libraries where the DBCO component can be combined with azide-bearing fluorophores, nanoparticles, or targeting scaffolds to create consistent, well-defined imaging tools.
3. Surface And Material Functionalization
Propane-1,2,3-(PEG11-DBCO) is frequently applied to functionalize polymeric and biomaterial surfaces that present azide groups, including PEG-rich coatings and engineered material platforms used in chemical biology. The PEG11 chain contributes to improved surface wettability and can help mitigate nonspecific adsorption during labeling or incubation steps, which is beneficial for creating stable, low-background functional materials. Material scientists and biomaterials groups use this reagent to incorporate clickable handles into surfaces for subsequent attachment of ligands, reporters, or capture elements in assay-oriented material designs.
4. Diagnostic Reagent Assembly
Propane-1,2,3-(PEG11-DBCO) is used in the assembly of diagnostic and analytical reagent components that rely on modular click coupling between DBCO and azide functionalities. In many workflows, DBCO-bearing PEG linkers are selected to balance reactivity with practical formulation needs, such as maintaining reagent solubility and compatibility with buffered, protein-containing environments. Diagnostic reagent developers use this SPAAC-ready chemistry to construct multivalent labeling reagents, conjugated standards, and reagent assemblies where controlled, catalyst-free coupling supports robust manufacturing of research-grade assay components.
Computed Properties
| XLogP3 | 0.5 |
| Hydrogen Bond Donor Count | 3 |
| Hydrogen Bond Acceptor Count | 42 |
| Rotatable Bond Count | 122 |
| Exact Mass | 2536.3262691 g/mol |
| Monoisotopic Mass | 2535.3229142 g/mol |
| Topological Polar Surface Area | 481Ų |
| Heavy Atom Count | 180 |
| Formal Charge | 0 |
| Complexity | 3960 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Recommended Services
Recommended Articles
- Hoechst Dyes: Definition, Structure, Mechanism and Applications
- Mastering the Spectrum: A Comprehensive Guide to Cy3 and Cy5 Dyes
- Fluorescent Probes: Definition, Structure, Types and Application
- Fluorescent Dyes: Definition, Mechanism, Types and Application
- Coumarin Dyes: Definition, Structure, Benefits, Synthesis and Uses
- Unlocking the Power of Fluorescence Imaging: A Comprehensive Guide
- Cell Imaging: Definitions, Systems, Protocols, Dyes, and Applications
- Lipid Staining: Definition, Principles, Methods, Dyes, and Uses
- Flow Cytometry: Definition, Principles, Protocols, Dyes, and Uses
- Nucleic Acid Staining: Definition, Principles, Dyes, Procedures, and Uses
Recommended Products
Online Inquiry