
m-PEG6-DBCO
| Catalog Number | R01-0367 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C32H42N2O8 |
| Molecular Weight | 582.7 |
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Product Introduction
m-PEG6-DBCO is a reagent that combines a dibenzocyclooctyne (DBCO) moiety with a methoxy polyethylene glycol (m-PEG) chain. This compound features the DBCO group, which is known for its ability to participate in strain-promoted azide-alkyne cycloaddition (SPAAC) reactions, an essential aspect of bioorthogonal chemistry. The m-PEG6 segment provides solubility and flexibility, making m-PEG6-DBCO suitable for applications in biomolecule conjugation, surface modification, and polymer functionalization where copper-free click chemistry is desired.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| IUPAC Name | 4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-N-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-4-oxobutanamide |
| SMILES | COCCOCCOCCOCCOCCOCCNC(=O)CCC(=O)N1CC2=CC=CC=C2C#CC3=CC=CC=C31 |
| InChI | InChI=1S/C32H42N2O8/c1-37-16-17-39-20-21-41-24-25-42-23-22-40-19-18-38-15-14-33-31(35)12-13-32(36)34-26-29-8-3-2-6-27(29)10-11-28-7-4-5-9-30(28)34/h2-9H,12-26H2,1H3,(H,33,35) |
| InChIKey | UKYUKFLMFXICNZ-UHFFFAOYSA-N |
Product Specification
| Storage | -20 °C |
Application
m-PEG6-DBCO is a methoxy-terminated, PEGylated dibenzocyclooctyne (DBCO) click chemistry reagent designed for strain-promoted azide–alkyne cycloaddition (SPAAC) with azide-functional partners. The DBCO moiety provides rapid, catalyst-free reactivity under mild conditions, while the PEG6 spacer improves aqueous solubility and reduces nonspecific interactions in biomolecular labeling workflows. This combination makes m-PEG6-DBCO widely used as a versatile handle for attaching functional payloads to azide-bearing biomolecules, polymers, and surfaces in chemical biology and materials research.
1. Bioconjugation Labeling
m-PEG6-DBCO is commonly used to label azide-functional proteins, peptides, antibodies, and nucleic-acid conjugates in chemical biology and proteomics workflows where bioorthogonal coupling is required. The PEG spacer helps maintain solubility and can reduce steric effects during conjugation, supporting consistent attachment of dyes, affinity tags, or other reporter groups derived from azide-containing precursors. Researchers also use m-PEG6-DBCO for surface and bead-based labeling strategies, including workflows that require clean SPAAC coupling without copper catalysts.
2. PEG-Based Surface Functionalization
m-PEG6-DBCO is frequently employed to functionalize azide-present surfaces and materials, including polymer films, microfluidic device coatings, and hydrogel interfaces, to create stable, noncovalent-resistant linkages through SPAAC. The PEG6 chain contributes antifouling characteristics and improved wetting in aqueous environments, which is valuable for building reproducible assay platforms and immobilized reagent layers. This reagent is also used to incorporate bioorthogonal attachment points for subsequent assembly of multicomponent materials, such as layered coatings or modular sensor surfaces.
3. Molecular Imaging Probe Assembly
m-PEG6-DBCO supports the modular construction of azide-bearing imaging probes by enabling reliable SPAAC conjugation to DBCO-functional scaffolds used in fluorescence and other optical readouts. The PEG6 linker is often selected to tune probe hydrophilicity and circulation-like behavior in labeling contexts, while minimizing aggregation and nonspecific binding during probe preparation and handling. In imaging reagent development, m-PEG6-DBCO is used as a practical coupling reagent to generate probe conjugates with controlled attachment sites and improved aqueous compatibility.
4. Polymer and Nanoparticle Conjugation
m-PEG6-DBCO is widely used in polymer chemistry and nanomaterials research to attach azide-functional moieties onto PEGylated backbones, nanoparticle surfaces, and colloidal carriers. The PEG spacer can help stabilize conjugates in buffer and reduce interparticle interactions that may otherwise complicate downstream characterization. Teams developing functional polymer conjugates, multivalent display architectures, or azide-to-DBCO assembly routes often rely on m-PEG6-DBCO as a convenient SPAAC reagent to introduce clickable handles and to build multicomponent nanomaterials with defined composition.
Computed Properties
| XLogP3 | 1.2 |
| Hydrogen Bond Donor Count | 1 |
| Hydrogen Bond Acceptor Count | 8 |
| Rotatable Bond Count | 21 |
| Exact Mass | 582.29411630 g/mol |
| Monoisotopic Mass | 582.29411630 g/mol |
| Topological Polar Surface Area | 105Ų |
| Heavy Atom Count | 42 |
| Formal Charge | 0 |
| Complexity | 828 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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