
m-PEG12-DBCO
| Catalog Number | R01-0363 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C₄₄H₆₆N₂O₁₄ |
| Molecular Weight | 847.00 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
m-PEG12-DBCO is a polyethylene glycol (PEG)-based PROTAC linker. m-PEG12-DBCO can be used in the synthesis of a series of PROTACs.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 98% |
| IUPAC Name | 4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-N-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-4-oxobutanamide |
| SMILES | COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCNC(=O)CCC(=O)N1CC2=CC=CC=C2C#CC3=CC=CC=C31 |
| InChI | InChI=1S/C44H66N2O14/c1-49-16-17-51-20-21-53-24-25-55-28-29-57-32-33-59-36-37-60-35-34-58-31-30-56-27-26-54-23-22-52-19-18-50-15-14-45-43(47)12-13-44(48)46-38-41-8-3-2-6-39(41)10-11-40-7-4-5-9-42(40)46/h2-9H,12-38H2,1H3,(H,45,47) |
| InChIKey | XOSOJWKHYZQWGG-UHFFFAOYSA-N |
| Solubility | In DMSO: 250 mg/mL (295.16 mM; Need ultrasonic) |
Product Specification
| Storage | -20°C, stored under nitrogen, away from moisture; In solvent, -80°C, 6 months; -20°C, 1 month (stored under nitrogen, away from moisture) |
Application
m-PEG12-DBCO is a difunctional, click-ready polyethylene glycol (PEG) conjugate featuring a DBCO (dibenzocyclooctyne) cyclooctyne for strain-promoted azide–alkyne cycloaddition (SPAAC). The meta-positioned PEG spacer provides water compatibility and tunable distance control between the reactive DBCO handle and the target biomolecule or material surface. This reagent is widely used in bioconjugation workflows where rapid, catalyst-free labeling is needed for constructing PEGylated probes, functional hydrogels, and imaging-ready molecular assemblies.
1. Biomolecule PEGylation
m-PEG12-DBCO is commonly used to introduce a stable, SPAAC-reactive DBCO handle onto proteins, peptides, antibodies, and other biomacromolecules via PEG-mediated spacing. Researchers select this reagent when they need to improve solubility, reduce nonspecific interactions, or modulate steric accessibility for subsequent azide-bearing partners. The PEG12 length is particularly useful for building conjugates where the functional group must be presented at a controlled distance from the biomolecule, enabling more consistent labeling densities and more reproducible performance in downstream assays and imaging experiments.
2. Surface And Hydrogel Functionalization
m-PEG12-DBCO is frequently incorporated into surface modification and biomaterial fabrication strategies to enable orthogonal, catalyst-free coupling to azide-functional materials. In hydrogel and coating workflows, the PEG spacer helps maintain hydration and reduces aggregation, while the DBCO moiety provides a robust attachment point for azide-bearing crosslinkers, biomolecule ligands, or affinity tags. This approach supports the creation of click-assembled matrices used in materials science and chemical biology, including platforms that require modular post-fabrication functionalization without harsh reaction conditions.
3. Molecular Imaging Probe Assembly
m-PEG12-DBCO is used as a key intermediate for assembling imaging probes and detection reagents that require SPAAC-compatible conjugation to azide-functional fluorophores, affinity reporters, or signal-generating components. The PEG12 spacer supports improved probe solubility and helps mitigate steric hindrance during multicomponent assembly, which is important when building conjugates with multiple functional domains. Many molecular imaging and diagnostic reagent development teams rely on DBCO–azide click handles to streamline probe construction and enable consistent batch-to-batch conjugation for research-grade labeling workflows.
4. Multivalent Targeting Constructs
m-PEG12-DBCO is well suited for constructing multivalent research tools where multiple azide-bearing ligands are installed onto a PEG scaffold for enhanced binding-site presentation. The PEG12 linker provides a flexible yet distance-controlled architecture that can reduce constraints imposed by rigid linkers and improve accessibility of targeting moieties. Chemical biology groups use this reagent to generate modular, click-assembled conjugates for mechanistic studies, reagent optimization, and library-style synthesis of multivalent constructs using azide-functional building blocks.
Computed Properties
| XLogP3 | 0.3 |
| Hydrogen Bond Donor Count | 1 |
| Hydrogen Bond Acceptor Count | 14 |
| Rotatable Bond Count | 39 |
| Exact Mass | 846.45140478 g/mol |
| Monoisotopic Mass | 846.45140478 g/mol |
| Topological Polar Surface Area | 160Ų |
| Heavy Atom Count | 60 |
| Formal Charge | 0 |
| Complexity | 1120 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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