
Hydroxy-PEG3-DBCO
| Catalog Number | R01-0381 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C27H32N2O6 |
| Molecular Weight | 480.6 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Hydroxy-PEG3-DBCO is a PEG linker containing a DBCO moiety and a terminal primary hydroxyl group. The hydroxyl can react with a variety of functional groups and the hydrophilic PEG spacer arm can provide better solubility to labeled molecules. DBCO is commonly used for copper-free Click Chemistry reactions.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 98% |
| IUPAC Name | 4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-N-[2-[2-[2-(2-hydroxyethoxy)ethoxy]ethoxy]ethyl]-4-oxobutanamide |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCC(=O)NCCOCCOCCOCCO |
| InChI | InChI=1S/C27H32N2O6/c30-14-16-34-18-20-35-19-17-33-15-13-28-26(31)11-12-27(32)29-21-24-7-2-1-5-22(24)9-10-23-6-3-4-8-25(23)29/h1-8,30H,11-21H2,(H,28,31) |
| InChIKey | ALXJBBJGKMRACK-UHFFFAOYSA-N |
Product Specification
| Storage | -20 °C |
Application
Hydroxy-PEG3-DBCO is a polyethylene glycol (PEG)-spaced dibenzocyclooctyne (DBCO) click reagent designed for strain-promoted azide–alkyne cycloaddition (SPAAC). The reagent couples a hydrophilic hydroxy-terminated PEG linker with the highly reactive DBCO cyclooctyne handle, enabling efficient attachment to azide-functional targets under catalyst-free conditions. Its PEG3 spacer and water-compatible profile make it widely used in bioconjugation workflows, where controlled solubility and reduced steric effects are important for labeling, surface functionalization, and probe assembly.
1. Protein And Peptide Labeling
Hydroxy-PEG3-DBCO is commonly used to install a DBCO handle onto biomolecules and to prepare azide-bearing protein or peptide conjugates for downstream click coupling. Researchers in chemical biology and proteomics rely on the PEG3 spacer to improve aqueous handling and to mitigate steric hindrance that can otherwise reduce labeling efficiency or slow conjugation kinetics. The hydroxy terminus also supports practical formulation and compatibility with common buffer systems used for biomolecule derivatization and probe preparation.
2. Antibody And Ligand Conjugation
Hydroxy-PEG3-DBCO is frequently incorporated into antibody and targeting-ligand development pipelines to enable modular assembly with azide-functional partners. In research settings, the PEG3 linker helps maintain solubility and can reduce nonspecific interactions during conjugate generation and purification, which is valuable when preparing multicomponent labeling reagents. The DBCO functionality provides a robust click handle for constructing well-defined conjugates used as imaging reagents, affinity tools, and assay components.
3. Surface Coating And Materials Functionalization
Hydroxy-PEG3-DBCO is used to functionalize polymeric and biomaterial surfaces that present azide groups, supporting the creation of bioactive coatings and engineered interfaces. Materials scientists often select PEG-spaced DBCO reagents to tune surface hydration and accessibility of reactive sites, improving the uniformity of surface modification and the consistency of subsequent conjugation steps. This application is particularly relevant for preparing azide-functional films, hydrogels, and scaffold materials intended for research-grade labeling and molecular immobilization.
4. Molecular Imaging Probe Assembly
Hydroxy-PEG3-DBCO is a practical building block for assembling azide-functional imaging probes and fluorescent or luminescent reporters into modular constructs. Probe developers use the PEG3 spacer to balance water solubility with spatial separation between the reporter and the conjugation site, which can improve handling and reduce aggregation during probe formulation. The DBCO handle enables straightforward SPAAC coupling to azide-tagged imaging components, supporting rapid iteration of probe designs for assay development and imaging reagent optimization.
Computed Properties
| XLogP3 | 0.9 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 6 |
| Rotatable Bond Count | 14 |
| Exact Mass | 480.22603674 g/mol |
| Monoisotopic Mass | 480.22603674 g/mol |
| Topological Polar Surface Area | 97.3Ų |
| Heavy Atom Count | 35 |
| Formal Charge | 0 |
| Complexity | 717 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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