
DBCO-PEG8-amine TFA salt
| Catalog Number | R01-0403 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C37H53N3O10 |
| Molecular Weight | 699.8 |
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Product Introduction
DBCO-PEG8-amine TFA salt is a heterobifunctional reagent featuring a dibenzylcyclooctyne (DBCO) moiety and an amine functional group separated by an eight-unit polyethylene glycol (PEG) spacer. The DBCO group participates in strain-promoted azide-alkyne cycloaddition (SPAAC) reactions, allowing for copper-free click chemistry applications, while the amine functionality can be used for further conjugation or modification with activated esters or isocyanates. This reagent is commonly incorporated into bioconjugation strategies for labeling biomolecules, facilitating surface immobilization, and enhancing polymer functionalization.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| IUPAC Name | N-[2-[2-[2-[2-[2-[2-[2-[2-(2-aminoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-4-oxobutanamide |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCC(=O)NCCOCCOCCOCCOCCOCCOCCOCCOCCN |
| InChI | InChI=1S/C37H53N3O10/c38-13-15-43-17-19-45-21-23-47-25-27-49-29-30-50-28-26-48-24-22-46-20-18-44-16-14-39-36(41)11-12-37(42)40-31-34-7-2-1-5-32(34)9-10-33-6-3-4-8-35(33)40/h1-8H,11-31,38H2,(H,39,41) |
| InChIKey | RNQRJPMIQPZGDT-UHFFFAOYSA-N |
Product Specification
| Storage | -20 °C |
Application
DBC0-PEG8-amine TFA salt is a DBCO-functionalized, PEG8-amine linker reagent designed for strain-promoted azide–alkyne cycloaddition (SPAAC) in bioconjugation workflows. The reagent combines a cyclooctyne (DBCO) click handle with a hydrophilic PEG spacer and a terminal primary amine, enabling attachment of biomolecules, surfaces, or polymeric scaffolds while maintaining water solubility and reduced nonspecific interactions. Its TFA salt form supports convenient handling for research-grade labeling, probe construction, and material functionalization where orthogonal, catalyst-free click chemistry is preferred.
1. Protein And Peptide Labeling
DBC0-PEG8-amine TFA salt is widely used to introduce a stable DBCO click handle onto proteins and peptides for downstream conjugation with azide-bearing partners. Researchers commonly employ the PEG8 spacer to improve accessibility of the reactive group and to mitigate steric hindrance during SPAAC coupling, which is particularly valuable when labeling antibodies, enzymes, or receptor-binding domains where maintaining binding-site accessibility is important for assay compatibility. The terminal amine also supports formulation and coupling strategies in labeling pipelines, such as preparing DBCO-functional conjugates that can be further reacted with azide-functional dyes, affinity tags, or imaging reporters.
2. Antibody Conjugation Workflows
DBC0-PEG8-amine TFA salt fits established antibody and affinity reagent development workflows that rely on modular click chemistry to assemble multicomponent constructs. In research settings, the DBCO group enables efficient SPAAC attachment to azide-functional detection reagents, while the PEG8 chain helps preserve solubility and reduces aggregation tendencies that can complicate conjugate handling. The presence of the primary amine supports practical intermediate steps, including preparing DBCO-PEG8-amine-containing building blocks for controlled attachment to biomolecule carriers, enabling consistent conjugate architectures used in binding assays, multiplex labeling experiments, and reagent library generation.
3. Surface and Material Functionalization
DBC0-PEG8-amine TFA salt is employed to functionalize biomaterial surfaces and polymeric materials with DBCO groups for subsequent azide-based patterning. The PEG8 spacer enhances wettability and can improve the presentation of the click handle at interfaces, which is advantageous for immobilizing azide-functional probes on hydrophilic coatings, sensor surfaces, and microfabricated platforms. The terminal amine provides a versatile handle for anchoring or for incorporating the reagent into surface modification strategies, supporting the creation of clickable materials used in assay development, affinity capture surfaces, and spatially resolved labeling formats.
4. Molecular Imaging Probe Assembly
DBC0-PEG8-amine TFA salt is commonly incorporated into molecular imaging and diagnostic-reagent development pipelines that use SPAAC to assemble probes from azide-bearing imaging moieties and targeting components. The DBCO click handle supports fast, catalyst-free conjugation, which is frequently selected to avoid conditions that can compromise sensitive biomolecular components or labile imaging labels. The PEG8 linker contributes to improved solubility and reduced nonspecific interactions, helping probe constructs remain compatible with aqueous labeling buffers and downstream analytical workflows such as chromatographic purification and imaging-readout preparation. The terminal amine further enables flexible intermediate design when constructing probe libraries with varied azide partners.
Computed Properties
| XLogP3 | -0.1 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 11 |
| Rotatable Bond Count | 29 |
| Exact Mass | 699.37309490 g/mol |
| Monoisotopic Mass | 699.37309490 g/mol |
| Topological Polar Surface Area | 149Ų |
| Heavy Atom Count | 50 |
| Formal Charge | 0 |
| Complexity | 960 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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