
DBCO-PEG6-DBCO
| Catalog Number | R01-0376 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C52H58N4O10 |
| Molecular Weight | 899.1 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
DBCO-PEG6-DBCO is a bifunctional reagent featuring two dibenzocyclooctyne (DBCO) moieties linked by a hexaethylene glycol (PEG6) spacer. The presence of DBCO groups allows for strain-promoted azide-alkyne cycloaddition (SPAAC) reactions, facilitating copper-free click chemistry applications. This compound is often utilized in bioconjugation strategies where the PEG6 linker imparts flexibility and solubility, enabling efficient macromolecular assembly and surface modification.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| IUPAC Name | N-[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]-3-[2-[2-[2-[2-[2-[3-[[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]amino]-3-oxopropoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanamide |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCNC(=O)CCOCCOCCOCCOCCOCCOCCC(=O)NCCC(=O)N4CC5=CC=CC=C5C#CC6=CC=CC=C64 |
| InChI | InChI=1S/C52H58N4O10/c57-49(53-25-21-51(59)55-39-45-13-3-1-9-41(45)17-19-43-11-5-7-15-47(43)55)23-27-61-29-31-63-33-35-65-37-38-66-36-34-64-32-30-62-28-24-50(58)54-26-22-52(60)56-40-46-14-4-2-10-42(46)18-20-44-12-6-8-16-48(44)56/h1-16H,21-40H2,(H,53,57)(H,54,58) |
| InChIKey | ZUUWARFXSSTKLT-UHFFFAOYSA-N |
Product Specification
| Storage | -20 °C |
Application
DBC0-PEG6-DBCO is a bifunctional, strained-alkyne click chemistry reagent built on two DBCO (dibenzocyclooctyne) groups connected through a PEG6 linker. As a copper-free strain-promoted azide–alkyne cycloaddition (SPAAC) crosslinker, it is widely used to assemble multivalent conjugates, link biomolecules, and functionalize materials where fast, catalyst-free labeling is required. The PEG spacer improves aqueous solubility and spacing control, making DBCO-PEG6-DBCO a common choice for modular bioconjugation workflows in chemical biology and biomaterials research.
1. Multivalent Protein Labeling
DBC0-PEG6-DBCO enables efficient construction of multivalent protein conjugates by bridging azide-functional biomolecules with two SPAAC-reactive DBCO termini. Researchers use it to increase effective labeling density for flow cytometry reagents, affinity probes, and cell-surface binding studies that benefit from enhanced avidity. The PEG6 tether helps maintain accessibility of the reactive groups, supporting robust conjugate formation in complex buffer conditions typical of protein labeling experiments.
2. Antibody–Probe Conjugation
DBC0-PEG6-DBCO is applied in antibody and targeting-ligand conjugation strategies where site-specific or modular attachment of imaging and detection handles is needed. By reacting with azide-bearing secondary reagents, dyes, or reporter constructs, the reagent supports the preparation of dual-functional antibody conjugates such as antibody–fluorophore or antibody–nanomaterial hybrids. The bifunctional design allows researchers to tune the distance between tags and reduce steric crowding, which is valuable for generating consistent labeling patterns across antibody lots.
3. Hydrogel and Surface Crosslinking
DBC0-PEG6-DBCO is frequently used to crosslink or functionalize azide-modified hydrogels and biomaterial surfaces via catalyst-free SPAAC chemistry. In biomaterials laboratories, it serves as a linker to incorporate bioactive motifs, immobilize fluorescent reporters, or create tunable networks that maintain water compatibility. The PEG spacer and dual DBCO functionality support formation of stable, well-distributed attachment points on polymer matrices, enabling reproducible material functionalization for microscopy, materials characterization, and assay development.
4. Molecular Imaging Probe Assembly
DBC0-PEG6-DBCO is well suited for assembling molecular imaging and diagnostic research probes that require modular conjugation of azide-functional components. Imaging teams use the reagent to connect fluorophores, quenchers, affinity tags, or nanoparticle surfaces into defined multicomponent constructs using SPAAC under mild conditions. The PEG6 linker helps preserve probe solubility and reduces non-specific aggregation, supporting the preparation of reagent sets used in optical imaging, fluorescence-based assays, and imaging-method development workflows.
Computed Properties
| XLogP3 | 3 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 10 |
| Rotatable Bond Count | 27 |
| Exact Mass | 898.41529406 g/mol |
| Monoisotopic Mass | 898.41529406 g/mol |
| Topological Polar Surface Area | 154Ų |
| Heavy Atom Count | 66 |
| Formal Charge | 0 |
| Complexity | 1520 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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