
DBCO-PEG12-DBCO
| Catalog Number | R01-0372 |
| Category | Cycloalkyne Dyes (DBCO) |
| Molecular Formula | C64H82N4O16 |
| Molecular Weight | 1163.4 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
DBCO-PEG12-DBCO is a bifunctional reagent featuring two dibenzocyclooctyne (DBCO) groups linked by a polyethylene glycol (PEG12) spacer. This compound participates in strain-promoted azide-alkyne cycloaddition (SPAAC) reactions, allowing for copper-free click chemistry applications. It is commonly used for bioconjugation, surface modification, and the assembly of macromolecular structures due to its ability to connect azide-functionalized molecules or surfaces in a bioorthogonal manner.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| IUPAC Name | N-[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]-3-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[3-[[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]amino]-3-oxopropoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanamide |
| SMILES | C1C2=CC=CC=C2C#CC3=CC=CC=C3N1C(=O)CCNC(=O)CCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCC(=O)NCCC(=O)N4CC5=CC=CC=C5C#CC6=CC=CC=C64 |
| InChI | InChI=1S/C64H82N4O16/c69-61(65-25-21-63(71)67-51-57-13-3-1-9-53(57)17-19-55-11-5-7-15-59(55)67)23-27-73-29-31-75-33-35-77-37-39-79-41-43-81-45-47-83-49-50-84-48-46-82-44-42-80-40-38-78-36-34-76-32-30-74-28-24-62(70)66-26-22-64(72)68-52-58-14-4-2-10-54(58)18-20-56-12-6-8-16-60(56)68/h1-16H,21-52H2,(H,65,69)(H,66,70) |
| InChIKey | BUKUUTNVQIUHKV-UHFFFAOYSA-N |
Product Specification
| Storage | -20 °C |
Application
DBCO-PEG12-DBCO is a bifunctional, PEG-linked dibenzocyclooctyne (DBCO) click chemistry reagent designed for strain-promoted azide–alkyne cycloaddition (SPAAC). Its two terminal DBCO groups separated by a flexible PEG12 spacer enable efficient multivalent conjugation to azide-bearing biomolecules, polymers, and surfaces without copper catalysis. This reagent is widely used in chemical biology and biomaterials workflows where controlled crosslinking, modular labeling, and stable probe or material assembly are required.
1. Multivalent Biomolecule Conjugation
DBCO-PEG12-DBCO is commonly used to generate multivalent conjugates from azide-functional proteins, peptides, antibodies, aptamers, or nucleic-acid binders, improving the density of reactive handles for downstream assembly. Researchers select this linker when they need simultaneous engagement of multiple azide sites on a target or when they want to tune conjugate architecture using a flexible PEG spacer that can reduce steric constraints. The dual DBCO termini also support modular workflows, such as sequential labeling strategies where one conjugation event installs a second azide-reactive element for subsequent coupling steps.
2. PEG-Based Hydrogel Crosslinking
DBCO-PEG12-DBCO is used in biomaterials research to crosslink or network-form azide-functional polymer systems, enabling the fabrication of PEG-based hydrogels with tunable mesh size and mechanical properties. Materials scientists rely on the bifunctional nature of the reagent to connect azide-bearing macromers into stable 3D architectures under mild, catalyst-free conditions compatible with sensitive biomolecule payloads. The PEG12 spacer contributes flexibility that can influence network formation and swelling behavior, making the reagent a practical choice for scaffold development, coating formation, and composite material assembly.
3. Surface Patterning And Coatings
DBCO-PEG12-DBCO is widely applied for immobilizing azide-functional ligands onto surfaces, including functionalized glass, polymer films, and microfabricated substrates used in chemical biology and materials characterization. The two DBCO groups allow the reagent to act as a spacered coupling bridge, facilitating higher local ligand density and improved surface presentation compared with monofunctional linkers. This approach is frequently used to create patterned biointerfaces for assay development, receptor-ligand studies, and reproducible immobilization of capture reagents on diagnostic and research platforms.
4. Imaging Probe And Reporter Assembly
DBCO-PEG12-DBCO supports the construction of imaging and detection probes by linking azide-tagged reporters, affinity reagents, or signal-generating components into defined multicomponent conjugates. Molecular imaging and diagnostic reagent developers use the dual DBCO functionality to assemble modular probe architectures where spacing and valency are important for consistent labeling density and conjugate stability in complex assay buffers. The PEG12 linker is particularly useful when probe performance depends on minimizing nonspecific interactions while maintaining accessible reactive sites for azide-bearing partners.
Computed Properties
| XLogP3 | 2.1 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 16 |
| Rotatable Bond Count | 45 |
| Exact Mass | 1162.57258254 g/mol |
| Monoisotopic Mass | 1162.57258254 g/mol |
| Topological Polar Surface Area | 210Ų |
| Heavy Atom Count | 84 |
| Formal Charge | 0 |
| Complexity | 1820 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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