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Cyanine5 NHS ester minimal dye
| Catalog Number | R01-0020 |
| Category | NHS Esters |
| Molecular Formula | C36H42BF4N3O4 |
| Molecular Weight | 667.5 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
Cyanine5 minimal dye for protein labeling, an analog of Cy5® minimal dye. This reagent is specially quantified for the use in 2D proteomics. Each package contains specified amount of NHS ester with quantity variation within 10%.
Chemical Information
Product Specification
Computed Properties
| Synonyms | Cyanine5 NHS ester |
| Purity | NMR 1H, HPLC-MS, functional testing |
| IUPAC Name | (2,5-dioxopyrrolidin-1-yl) 6-[3,3-dimethyl-2-[5-(1,3,3-trimethylindol-1-ium-2-yl)penta-2,4-dienylidene]indol-1-yl]hexanoate;trifluoroborane;fluoride |
| Canonical SMILES | B(F)(F)F.CC1(C2=CC=CC=C2[N+](=C1C=CC=CC=C3C(C4=CC=CC=C4N3CCCCCC(=O)ON5C(=O)CCC5=O)(C)C)C)C.[F-] |
| InChI | InChI=1S/C36H42N3O4.BF3.FH/c1-35(2)26-16-11-13-18-28(26)37(5)30(35)20-8-6-9-21-31-36(3,4)27-17-12-14-19-29(27)38(31)25-15-7-10-22-34(42)43-39-32(40)23-24-33(39)41;2-1(3)4;/h6,8-9,11-14,16-21H,7,10,15,22-25H2,1-5H3;;1H/q+1;;/p-1 |
| InChIKey | LWBHPHPQYRCYHI-UHFFFAOYSA-M |
| Appearance | dark blue solid |
| Excitation | 645 |
| Emission | 660 |
| Storage | 12 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
| Hydrogen Bond Donor Count | 0 |
| Hydrogen Bond Acceptor Count | 9 |
| Rotatable Bond Count | 11 |
| Exact Mass | 667.3204496 g/mol |
| Monoisotopic Mass | 667.3204496 g/mol |
| Topological Polar Surface Area | 69.9Ų |
| Heavy Atom Count | 48 |
| Formal Charge | 0 |
| Complexity | 1200 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 3 |
| Covalently-Bonded Unit Count | 3 |
| Compound Is Canonicalized | Yes |
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