
Dihydrorhodamine 6G | CAS 217176-83-5
| Catalog Number | A16-0142 |
| Category | Mitochondrial Fluorescent Probes |
| Molecular Formula | C28H32N2O3 |
| Molecular Weight | 444.57 |
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Product Introduction
Dihydrorhodamine 6G is a cell-permeable ROS probe that emits bright green fluorescence after oxidation. Ideal for flow cytometry and fluorescence microscopy of oxidative activity.
Chemical Information
Product Specification
Application
Computed Properties
Patents
Chemical Information
| Synonyms | DHR 6G |
| IUPAC Name | ethyl 2-[3,6-bis(ethylamino)-2,7-dimethyl-9H-xanthen-9-yl]benzoate |
| SMILES | CCNC1=CC2=C(C=C1C)C(C3=C(O2)C=C(C(=C3)C)NCC)C4=CC=CC=C4C(=O)OCC |
| InChI | InChI=1S/C28H32N2O3/c1-6-29-23-15-25-21(13-17(23)4)27(19-11-9-10-12-20(19)28(31)32-8-3)22-14-18(5)24(30-7-2)16-26(22)33-25/h9-16,27,29-30H,6-8H2,1-5H3 |
| InChIKey | BUJYUNAFKYHMAS-UHFFFAOYSA-N |
| Appearance | Lite Pink Solid |
Product Specification
| Excitation | 528 nm |
| Emission | 551 nm |
Application
Dihydrorhodamine 6G is a reduced, cell-permeable fluorogenic dye that is widely used as a fluorescence readout for oxidative activity in biological samples. In the presence of oxidizing species, it is converted to the highly fluorescent rhodamine 6G form, enabling turn-on monitoring of redox-driven processes with standard fluorescence microscopy and plate-based assays. This property makes it a practical reagent for studying oxidative stress, reactive oxygen species-associated signaling, and related assay workflows where dynamic fluorescence generation is required.
1. Oxidative Stress Imaging
Dihydrorhodamine 6G is frequently used in cellular fluorescence microscopy to visualize oxidative stress-associated redox changes in cultured cells and primary cell preparations. Researchers employ the dye as a turn-on probe to track spatially resolved increases in oxidizing activity after stimulation with pro-oxidant reagents or under conditions that perturb cellular redox homeostasis. Because the fluorescence signal arises from oxidation-dependent conversion, it is commonly integrated into time-course imaging experiments to compare oxidative dynamics across experimental conditions, including treatment versus control groups.
2. Flow Cytometry ROS Readout
Dihydrorhodamine 6G is also used in flow cytometry-based assays to quantify oxidative activity at the single-cell level. In these workflows, the dye is loaded into cells and the resulting fluorescence intensity is measured by flow cytometers equipped for rhodamine-family emission detection, allowing researchers to generate distributions of oxidized dye signal across cell populations. This approach is commonly applied in mechanistic studies of oxidative stress responses, screening of redox-modulating conditions, and comparative analyses of oxidative phenotypes between cell types or treatment groups.
3. Plate-Based Fluorescence Assays
Dihydrorhodamine 6G supports fluorescence microplate assays for monitoring oxidant generation or oxidative capacity in cell lysates, reaction mixtures, or co-culture supernatants. In assay development settings, the dye's oxidation-driven fluorescence increase provides a convenient kinetic readout that can be followed over time in multiwell formats, enabling throughput-friendly evaluation of oxidative processes. Experimental teams often use this reagent to benchmark oxidative reactivity under different buffer conditions, enzymatic setups, or antioxidant/cofactor presence, using fluorescence intensity trends as the primary quantitative endpoint.
4. Enzyme and Redox Studies
Dihydrorhodamine 6G is frequently incorporated into biochemical and chemical biology studies that examine redox-active enzymes and electron-transfer-linked oxidative pathways. Researchers use the dye to monitor oxidizing equivalents produced in defined in vitro systems, including setups designed to generate reactive oxygen species-associated fluorescence turn-on. This makes it useful for comparing relative oxidative output across enzyme variants, inhibitor conditions, or cofactor dependencies, where the readout is based on oxidation-dependent conversion to the fluorescent rhodamine species.
Computed Properties
| XLogP3 | 6.6 |
| Hydrogen Bond Donor Count | 2 |
| Hydrogen Bond Acceptor Count | 5 |
| Rotatable Bond Count | 8 |
| Exact Mass | 444.24129289 g/mol |
| Monoisotopic Mass | 444.24129289 g/mol |
| Topological Polar Surface Area | 59.6Ų |
| Heavy Atom Count | 33 |
| Formal Charge | 0 |
| Complexity | 609 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| US-10351526-B2 | Coloring curable resin composition, cured film, color filter, method for manufacturing color filter, solid-state imaging device, image display device, compound, and cation | 2014-03-18 |
| US-2008090266-A1 | Method of Selecting a Cardiomyoctye Using Intracellular Mitochondria as an Indicator | 2004-08-27 |
| US-8623649-B2 | Method of selecting a cardiomyoctye using intracellular mitochondria as an indicator | 2004-08-27 |
| EP-0212450-A1 | Solid scintillator counting compositions | 1985-08-16 |
| US-4692266-A | Solid scintillator counting compositions | 1985-08-16 |
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