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C6 NBD Glucosylceramide | CAS 94885-03-7
| Catalog Number | A16-0047 |
| Category | Lipid Fluorescent Probes |
| Molecular Formula | C36H59N5O11 |
| Molecular Weight | 737.88 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
C6 NBD Glucosylceramide is a glycosphingolipid analog bearing a β-glucose headgroup and a short acyl chain tagged with an NBD fluorophore, designed for monitoring glucosylceramide metabolism and intracellular transport. Its fluorescent label enables sensitive tracking of glycosphingolipid trafficking in live cells, while the short chain improves solubility and integration into membranes. This molecule serves as an essential probe for studying glucosylceramide synthase activity, vesicular sorting, and glycosphingolipid dynamics. C6 NBD Glucosylceramide is particularly valuable for investigating how glucosylation affects lipid mobility, curvature, and compartmentalization within biological membranes.
Chemical Information
Product Specification
Computed Properties
| Synonyms | N-hexanoyl-NBD-Glucosylceramide; N-[(1S,2R,3E)-1-[(β-D-glucopyranosyloxy)methyl]-2-hydroxy-3-heptadecen-1-yl]-6-[(7-nitro-2,1,3-benzoxadiazol-4-yl)amino]-hexanamide |
| Purity | ≥98% |
| Shelf Life | 1 Year |
| IUPAC Name | N-[(E,2S,3R)-3-hydroxy-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoctadec-4-en-2-yl]-6-[(4-nitro-2,1,3-benzoxadiazol-7-yl)amino]hexanamide |
| Canonical SMILES | CCCCCCCCCCCCCC=CC(C(COC1C(C(C(C(O1)CO)O)O)O)NC(=O)CCCCCNC2=CC=C(C3=NON=C23)[N+](=O)[O-])O |
| InChI | InChI=1S/C36H59N5O11/c1-2-3-4-5-6-7-8-9-10-11-12-13-15-18-28(43)26(24-50-36-35(47)34(46)33(45)29(23-42)51-36)38-30(44)19-16-14-17-22-37-25-20-21-27(41(48)49)32-31(25)39-52-40-32/h15,18,20-21,26,28-29,33-37,42-43,45-47H,2-14,16-17,19,22-24H2,1H3,(H,38,44)/b18-15+/t26-,28+,29+,33+,34-,35+,36+/m0/s1 |
| InChIKey | ZYEQNDHFYIPTAY-YAIFWNLCSA-N |
| Appearance | Solid Powder |
| Storage | Store at -20°C |
| XLogP3 | 5.7 |
| Hydrogen Bond Donor Count | 7 |
| Hydrogen Bond Acceptor Count | 14 |
| Rotatable Bond Count | 26 |
| Exact Mass | 737.42110772 g/mol |
| Monoisotopic Mass | 737.42110772 g/mol |
| Topological Polar Surface Area | 246Ų |
| Heavy Atom Count | 52 |
| Formal Charge | 0 |
| Complexity | 1020 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 7 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 1 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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