
DBCO-N-bis(PEG4-NHS ester)
| Catalog Number | R01-0076 |
| Category | Alkynes |
| Molecular Formula | C49H62N4O18 |
| Molecular Weight | 995.1 |
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Product Introduction
DBCO-N-bis(PEG4-NHS ester) is a click chemistry crosslinker with two NHS ester groups. The NHS active esters can be used to label the primary amines (-NH2) of proteins and other amine-containing molecules.The DBCO group is very reactive with azide molecule via copper-free Click Chemistry.
Chemical Information
Product Specification
Application
Computed Properties
Chemical Information
| Purity | 95% |
| IUPAC Name | (2,5-dioxopyrrolidin-1-yl) 3-[2-[2-[2-[2-[[4-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-4-oxobutanoyl]-[2-[2-[2-[2-[3-(2,5-dioxopyrrolidin-1-yl)oxy-3-oxopropoxy]ethoxy]ethoxy]ethoxy]ethyl]amino]ethoxy]ethoxy]ethoxy]ethoxy]propanoate |
| SMILES | C1CC(=O)N(C1=O)OC(=O)CCOCCOCCOCCOCCN(CCOCCOCCOCCOCCC(=O)ON2C(=O)CCC2=O)C(=O)CCC(=O)N3CC4=CC=CC=C4C#CC5=CC=CC=C53 |
| InChI | InChI=1S/C49H62N4O18/c54-42(11-12-43(55)51-37-40-7-2-1-5-38(40)9-10-39-6-3-4-8-41(39)51)50(19-23-64-27-31-68-35-33-66-29-25-62-21-17-48(60)70-52-44(56)13-14-45(52)57)20-24-65-28-32-69-36-34-67-30-26-63-22-18-49(61)71-53-46(58)15-16-47(53)59/h1-8H,11-37H2 |
| InChIKey | LTXDZCUWVWVRMS-UHFFFAOYSA-N |
| Solubility | DMSO, DCM, DMF |
Product Specification
| Storage | -20 °C |
Application
DBCO-N-bis(PEG4-NHS ester) is a bifunctional DBCO-based click chemistry reagent that combines a strained cyclooctyne (DBCO) for copper-free strain-promoted azide–alkyne cycloaddition (SPAAC) with two N-hydroxysuccinimide (NHS) ester groups for amine reactivity. The PEG4 spacers enhance aqueous solubility and provide flexible distance control between the conjugation handle and the click-active DBCO moiety. This reagent is commonly used to generate azide-reactive bioconjugates, dual-functional labeling reagents, and modular platforms for assembling biomolecule–material or biomolecule–probe constructs in chemical biology and molecular imaging workflows.
1. Protein Labeling Workflows
DBCO-N-bis(PEG4-NHS ester) is used to install click-ready handles onto proteins and peptides through NHS-ester coupling to accessible primary amines such as lysine side chains and N-termini. The dual NHS functionality supports higher labeling density or improved stoichiometric control when preparing protein conjugates intended for subsequent azide-bearing partners, including cell-surface targets, affinity tags, or imaging ligands. Researchers frequently select this reagent when they need a robust, water-compatible conjugation step followed by copper-free click assembly, enabling streamlined workflows for probe generation, assay reagent preparation, and multicomponent labeling strategies.
2. Antibody and Affinity Conjugates
DBCO-N-bis(PEG4-NHS ester) is well suited for building antibody conjugates and other affinity reagent constructs where orthogonal modular assembly is required. The NHS esters enable rapid attachment to antibody lysines to introduce DBCO groups, while the SPAAC handle allows later coupling to azide-functional reporters, polymers, nanoparticles, or targeting modules without copper-related limitations. This approach is widely adopted in immunochemistry and diagnostic reagent development to create customizable antibody–probe formats, including multivalent labeling schemes and platforms that benefit from flexible spacing provided by the PEG4 linkers.
3. Surface and Material Functionalization
DBCO-N-bis(PEG4-NHS ester) is commonly employed to functionalize biomaterials and surfaces that present reactive amines, including amine-terminated polymers, hydrogel matrices, and protein-coated substrates. By coupling NHS esters to surface-accessible amines, the reagent introduces DBCO moieties that can be addressed later with azide-functional biomolecules or imaging components via copper-free click chemistry. This two-step strategy supports fabrication of modular material interfaces for biosensing, research imaging tools, and cell-interaction studies where spatially controlled presentation of clickable ligands is advantageous.
4. Multivalent Probe Assembly
DBCO-N-bis(PEG4-NHS ester) supports the creation of multivalent chemical biology probes by providing both conjugation capacity (two NHS esters) and a click handle (DBCO) for downstream assembly with azide-bearing reporter units. Teams developing fluorescent, luminescent, or affinity-based probe libraries often use this reagent to standardize the introduction of SPAAC-reactive sites onto a common scaffold, enabling consistent coupling to a variety of azide-modified tags. The PEG4 spacing helps reduce steric constraints during labeling and click assembly, improving the practical usability of the reagent in workflows that require reproducible probe architecture and modular interchangeability.
Computed Properties
| XLogP3 | -1.1 |
| Hydrogen Bond Donor Count | 0 |
| Hydrogen Bond Acceptor Count | 18 |
| Rotatable Bond Count | 37 |
| Exact Mass | 994.40591114 g/mol |
| Monoisotopic Mass | 994.40591114 g/mol |
| Topological Polar Surface Area | 242Ų |
| Heavy Atom Count | 71 |
| Formal Charge | 0 |
| Complexity | 1690 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
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