
BDP TMR tetrazine
| Catalog Number | F01-0272 |
| Category | BODIPY |
| Molecular Formula | C31H30BF2N7O2 |
| Molecular Weight | 581.42 |
* Please be kindly noted products are not for therapeutic use. We do not sell to patients.
Product Introduction
BDP TMR tetrazine is an orange-fluorescent dye with a termial tetrazine group. The terminal methyltetrazine enables fast click reaction with TCO (trans-cycloctene).
Chemical Information
Product Specification
Application
Chemical Information
| IUPAC Name | 3-[2,2-difluoro-12-(4-methoxyphenyl)-4,6-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-5-yl]-N-[[4-(6-methyl-1,2,4,5-tetrazin-3-yl)phenyl]methyl]propanamide |
| SMILES | [B-]1(N2C(=CC=C2C3=CC=C(C=C3)OC)C=C4[N+]1=C(C(=C4C)CCC(=O)NCC5=CC=C(C=C5)C6=NN=C(N=N6)C)C)(F)F |
| InChI | InChI=1S/C31H30BF2N7O2/c1-19-27(14-16-30(42)35-18-22-5-7-24(8-6-22)31-38-36-21(3)37-39-31)20(2)40-29(19)17-25-11-15-28(41(25)32(40,33)34)23-9-12-26(43-4)13-10-23/h5-13,15,17H,14,16,18H2,1-4H3,(H,35,42) |
| InChIKey | CAOATHMFRXRBNY-UHFFFAOYSA-N |
| Appearance | Red Powder |
Product Specification
| Excitation | 542 |
| Emission | 574 |
Application
BDP TMR tetrazine is a tetrazine-functionalized BODIPY-TMR conjugate designed for fast, strain-promoted inverse-electron-demand Diels-Alder click chemistry workflows. In bioconjugation and fluorescence labeling, it serves as a reactive tetrazine component that enables efficient attachment of fluorescent tags to biomolecules, probes, and biomaterial surfaces under conditions commonly used for chemical biology and molecular imaging. The BDP-TMR fluorophore provides a bright red/orange emission signal for visualization and readout in fluorescence microscopy and related analytical platforms.
1. Biomolecule Fluorescent Labeling
BDP TMR tetrazine is frequently used by chemical biology and imaging groups to fluorescently label proteins, peptides, and other functional biomolecules through tetrazine-based click conjugation. Researchers incorporate it into labeling schemes where a tetrazine handle is reacted with a complementary strained alkene/alkyne partner to generate stable fluorescent conjugates for downstream imaging, tracking, and assay development. Its fluorophore content supports direct visualization of labeled targets in microscopy-based workflows, including studies of binding, uptake, and localization in model biological systems.
2. Fluorescent Probe Construction
BDP TMR tetrazine is used in fluorescent probe development to assemble modular imaging reagents that combine a reactive tetrazine moiety with a BDP-TMR reporting dye. Probe builders leverage the click-compatible tetrazine chemistry to rapidly generate conjugates from targeting ligands (e.g., affinity reagents) and imaging scaffolds, enabling flexible swapping of recognition components without redesigning the fluorophore. This approach is particularly valuable for constructing multicomponent fluorescent probes intended for microscopy readouts, where controlled dye installation and consistent fluorescence performance are important for reproducible imaging experiments.
3. Biomaterial And Surface Functionalization
BDP TMR tetrazine supports fluorescence-enabled surface modification of polymers, hydrogels, and other biomaterial platforms where a tetrazine-functional handle is reacted with complementary click partners to install fluorescent reporters. Materials researchers use it to create labeled coatings and functional surfaces for studying material-biomolecule interactions, surface binding events, and spatial distribution of adsorbed or immobilized components. The resulting fluorescently tagged materials can be analyzed by fluorescence microscopy and related imaging methods to quantify localization patterns and guide biomaterials optimization.
4. Targeted Imaging Conjugate Assembly
BDP TMR tetrazine is commonly incorporated into targeted imaging conjugate workflows that require a reliable fluorescent labeling step compatible with click chemistry. Molecular imaging teams use the tetrazine functionality to couple fluorescent BDP-TMR reporting groups to targeting constructs that carry the complementary strained cycloalkene/alkyne functionality, producing imaging-ready conjugates for visualization studies. This use case aligns with research needs for modular conjugate assembly, enabling consistent fluorescent labeling of targeting reagents used in microscopy experiments and fluorescence-based characterization.
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