
BDP TMR amine
| Catalog Number | F01-0018 |
| Category | BODIPY |
| Molecular Formula | C27H36BClF2N4O2 |
| Molecular Weight | 532.86 |
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Product Introduction
BDP TMR is a dye for TAMRA channel. Unlike original TAMRA, it however possesses very good quantum yield, and therefore high brightness. This derivative contains a primary amine group that can be conjugated with various electrophiles. It can also participate in enzymatic transamination reaction.
Chemical Information
Product Specification
Application
Chemical Information
| Related CAS | 2183473-08-5 (free base) |
| Purity | NMR 1H, HPLC-MS (95%) |
| Solubility | good in alcohols, DMF, DMSO |
| Appearance | violet solid |
Product Specification
| Fluorescence Quantum Yield | 0.95 |
| Excitation | 545 |
| Emission | 570 |
| Storage | 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate. |
Application
BDP TMR amine is a reactive, amine-functionalized fluorescent dye designed for convenient covalent incorporation into biomolecules and labeling workflows. As a TMR (tetramethylrhodamine)-type fluorophore, it provides strong red fluorescence for traceable conjugates in fluorescence microscopy and fluorescence-based assays, while the amine handle supports stable dye attachment to amine-reactive chemistries or downstream conjugation strategies.
1. Protein Fluorescent Labeling
BDP TMR amine is frequently used by protein chemistry and chemical biology groups to generate fluorescently labeled proteins for localization studies, binding assays, and reagent tracking. Researchers typically incorporate the dye into antibodies, enzymes, affinity reagents, or purified protein constructs to enable red-channel readouts in standard fluorescence microscopes and plate readers. The amine functionality supports workflows where dye conjugates are prepared for downstream imaging experiments, including monitoring of protein distribution in complex samples such as cell lysates, purified biomolecular assemblies, or immobilized protein surfaces.
2. Fluorescence Microscopy Tracing
BDP TMR amine is used as a labeling reagent for cellular and biomaterials imaging experiments where red fluorescence visualization is required. In microscopy workflows, dye-labeled biomolecules help track adsorption, uptake, or localization patterns on substrates, hydrogels, and engineered surfaces, enabling researchers to correlate fluorescent signal with sample preparation conditions. The dye's TMR-class emission is commonly leveraged for multi-color experiments where a red emission channel is advantageous for separating signals from green fluorophores, supporting practical imaging of labeled targets in fixed or prepared samples.
3. Flow Cytometry Conjugates
BDP TMR amine supports development of fluorescent conjugates used in flow cytometry for quantifying labeled biomolecules associated with cells or cell-derived materials. In typical assay development, researchers prepare dye-labeled antibodies, probes, or binding reagents that report on binding to cell-surface targets or labeling of specific populations, with the TMR emission providing a red fluorescence signal that can be collected on standard cytometers. The amine-reactive labeling strategy enables consistent preparation of conjugates for comparative studies across experimental conditions, including panel-based experiments where spectral separation from other fluorophores is important.
4. Biomaterial Surface Functionalization
BDP TMR amine is also applied in biomaterials and surface engineering workflows to introduce fluorescent tags into functionalized materials used for imaging and characterization. Researchers incorporate the dye into polymer coatings, linker-modified surfaces, or labeled biomaterial constructs to visualize distribution, coating uniformity, and binding of surface-associated components. Red fluorescence from the TMR fluorophore enables convenient inspection by fluorescence microscopy and qualitative imaging of labeled materials, supporting iterative optimization of surface chemistries and conjugate attachment strategies.
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