
BDP FL ceramide | CAS 2730893-01-1
| Catalog Number | F01-0268 |
| Category | BODIPY |
| Molecular Formula | C32H50BF2N3O3 |
| Molecular Weight | 573.57 |
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Product Introduction
BDP FL ceramide is a synthetic fluorescent lipid, a conjugate of green-emitting BDP FL fluorophore with sphingosine.
Chemical Information
Product Specification
Application
Chemical Information
| IUPAC Name | 3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[(E,2R,3R)-1,3-dihydroxyoctadec-4-en-2-yl]propanamide |
| SMILES | [B-]1(N2C(=CC(=C2C=C3[N+]1=C(C=C3)CCC(=O)NC(CO)C(C=CCCCCCCCCCCCCC)O)C)C)(F)F |
| InChI | InChI=1S/C32H50BF2N3O3/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-31(40)29(24-39)36-32(41)21-20-27-18-19-28-23-30-25(2)22-26(3)37(30)33(34,35)38(27)28/h16-19,22-23,29,31,39-40H,4-15,20-21,24H2,1-3H3,(H,36,41)/b17-16+/t29-,31-/m1/s1 |
| InChIKey | GPAWNLZVULWMPQ-MRJFNVGJSA-N |
| Appearance | Orange Semisolid |
Product Specification
| Excitation | 503 |
| Emission | 509 |
Application
BDP FL ceramide is a fluorescent ceramide analog used to trace sphingolipid metabolism and intracellular trafficking in lipid-based signaling studies. As a ceramide-derived molecular probe with BODIPY-family fluorescence, it integrates into lipid pathways and enables visualization of ceramide-related processes by fluorescence microscopy and related imaging workflows. Researchers commonly employ it to monitor how ceramide species distribute across cellular compartments and to support mechanistic studies of lipid transport and stress-responsive lipid signaling.
1. Lipid Trafficking Imaging
BDP FL ceramide is widely used in fluorescence microscopy workflows to track ceramide movement and accumulation within cells, including studies focused on lipid trafficking routes and compartmental redistribution. Biologists typically incubate cells with the probe under controlled conditions and then image fluorescence to compare spatial patterns across experimental treatments. Because the probe is designed around a ceramide scaffold, it is frequently used to connect observed fluorescence localization to ceramide-dependent lipid dynamics rather than to generic membrane staining.
2. Sphingolipid Metabolism Studies
BDP FL ceramide supports sphingolipid metabolism research where researchers want a fluorescent readout linked to ceramide handling and downstream lipid processing. Molecular and cell biology groups use it to follow changes in fluorescence intensity and distribution as a function of metabolic perturbations, enabling side-by-side comparisons between conditions in imaging-based or plate-based fluorescence assays. This makes the reagent useful for screening experimental variables in lipid biochemistry workflows, including studies of lipid pathway modulation and time-course tracking.
3. Flow Cytometry Lipid Uptake
BDP FL ceramide is also used in flow cytometry to quantify probe-associated fluorescence as a proxy for ceramide uptake and intracellular processing at the single-cell level. Cell analysis laboratories commonly stain cells with the probe and then measure fluorescence intensity distributions to assess population-level shifts under different experimental conditions. This application is particularly useful when researchers need quantitative readouts across many samples while still relying on ceramide scaffold-driven cellular handling rather than nonspecific membrane dyes.
4. Membrane-Associated Localization
BDP FL ceramide can be leveraged for membrane-associated localization studies where researchers examine how ceramide-like lipids associate with cellular membranes and lipid-rich regions. Imaging teams use the fluorescence signal to map where ceramide analog fluorescence accumulates relative to cellular structures, supporting qualitative comparisons of compartmental enrichment across experimental groups. The ceramide-based design helps distinguish this workflow from purely hydrophobic membrane stains by anchoring the probe's behavior to ceramide lipid biology.
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