6-JOE Alkyne

What We Offer

6-JOE Alkyne

6-JOE Alkyne

Catalog Number R02-0028
Category Alkynes
Molecular Formula C26H17Cl2NO8
Molecular Weight 542.32
Inquiry

* Please be kindly noted products are not for therapeutic use. We do not sell to patients.

Product Introduction

6-JOE Alkyne is a fluorescent labeling reagent featuring a 6-carboxy-4',5'-dichloro-2',7'-dimethoxyfluorescein (6-JOE) fluorophore conjugated to an alkyne functional group. The alkyne moiety enables bioorthogonal click chemistry reactions, particularly copper-catalyzed or strain-promoted azide-alkyne cycloaddition, allowing selective and efficient labeling of biomolecules. It is used in oligonucleotide modification, surface functionalization, and bioconjugation applications.

  • Chemical Information

  • Product Specification

  • Application

  • Computed Properties

Chemical Information

Synonyms JOE alkyne, 6-isomer; 4',5'-Dichloro-3',6'-dihydroxy-2',7'-dimethoxy-3-oxo-N-(prop-2-yn-1-yl)-3H-spiro[isobenzofuran-1,9'-xanthene]-6-carboxamide; Spiro[isobenzofuran-1(3H),9'-[9H]xanthene]-6-carboxamide, 4',5'-dichloro-3',6'-dihydroxy-2',7'-dimethoxy-3-oxo-N-2-propyn-1-yl-; 4',5'-Dichloro-3',6'-dihydroxy-2',7'-dimethoxy-3-oxo-N-(2-propyn-1-yl)-3H-spiro[2-benzofuran-1,9'-xanthene]-6-carboxamide
Purity NMR 1H, HPLC-MS (95%)
IUPAC Name 4',5'-dichloro-3',6'-dihydroxy-2',7'-dimethoxy-1-oxo-N-prop-2-ynylspiro[2-benzofuran-3,9'-xanthene]-5-carboxamide
SMILES COC1=C(C(=C2C(=C1)C3(C4=CC(=C(C(=C4O2)Cl)O)OC)C5=C(C=CC(=C5)C(=O)NCC#C)C(=O)O3)Cl)O
InChI InChI=1S/C26H17Cl2NO8/c1-4-7-29-24(32)11-5-6-12-13(8-11)26(37-25(12)33)14-9-16(34-2)20(30)18(27)22(14)36-23-15(26)10-17(35-3)21(31)19(23)28/h1,5-6,8-10,30-31H,7H2,2-3H3,(H,29,32)
InChIKey FITDEERKHNKYNG-UHFFFAOYSA-N
Solubility Soluble in DMF, DMSO
Appearance Orange solid

Product Specification

ε, L⋅mol-1⋅cm-1 75000
Excitation 533
Emission 554
Storage Store at -20 °C

Application

Computed Properties

XLogP3 4
Hydrogen Bond Donor Count 3
Hydrogen Bond Acceptor Count 8
Rotatable Bond Count 4
Exact Mass 541.0331219 g/mol
Monoisotopic Mass 541.0331219 g/mol
Topological Polar Surface Area 124Ų
Heavy Atom Count 37
Formal Charge 0
Complexity 920
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 1
Compound Is Canonicalized Yes

Recommended Services

Recommended Articles

Recommended Products

Online Inquiry

Verification code
cartIcon
Inquiry Basket