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BODIPY TR methyl ester | 150152-63-9
| Catalog Number | F01-0158 |
| Category | BODIPY |
| Molecular Formula | C22H17BF2O3S |
| Molecular Weight | 438.25 |
| Catalog Number | Size | Price | Quantity |
|---|---|---|---|
| F01-0158 | -- | $-- |
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Product Introduction
BODIPY TR methyl ester is a cell-permeant, red-fluorescent dye that is used for staining organelles like mitochondria, endoplasmic reticulum, and Golgi apparatus. It has been used as a counterstain in cells or tissues expressing green fluorescent protein (GFP).
Chemical Information |
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|---|---|
| Synonyms | CellHunt EverFluor TR Methyl Ester; Lipophilic Counterstain For GFP; CellTrace BODIPY TR methyl ester |
| IUPAC Name | methyl 2-[4-(2,2-difluoro-12-thiophen-2-yl-3-aza-1-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-1(12),4,6,8,10-pentaen-4-yl)phenoxy]acetate |
| Canonical SMILES | [B-]1(N2C(=CC=C2C3=CC=CS3)C=C4[N+]1=C(C=C4)C5=CC=C(C=C5)OCC(=O)OC)(F)F |
| InChI | InChI=1S/C22H17BF2N2O3S/c1-29-22(28)14-30-18-8-4-15(5-9-18)19-10-6-16-13-17-7-11-20(21-3-2-12-31-21)27(17)23(24,25)26(16)19/h2-13H,14H2,1H3 |
| InChI Key | HQMDVGPFFTVIIE-UHFFFAOYSA-N |
- Product Specification
| Excitation | 494 |
| Emission | 517 |
Computed Properties | |
|---|---|
| Hydrogen Bond Donor Count | 0 |
| Hydrogen Bond Acceptor Count | 7 |
| Rotatable Bond Count | 6 |
| Exact Mass | 438.1021001 g/mol |
| Monoisotopic Mass | 438.1021001 g/mol |
| Topological Polar Surface Area | 71.7Ų |
| Heavy Atom Count | 31 |
| Formal Charge | 0 |
| Complexity | 826 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 0 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| Covalently-Bonded Unit Count | 1 |
| Compound Is Canonicalized | Yes |
Patents
| Publication Number | Title | Priority Date |
|---|---|---|
| US-2022315614-A1 | Reducing agents and uses thereof | 2021-03-19 |
| US-11174281-B1 | Modified nucleotides and uses thereof | 2020-04-24 |
| WO-2021216998-A1 | Modified nucleotides and uses thereof | 2020-04-24 |
| EP-4117682-A1 | Modified nucleotides and uses thereof | 2020-04-24 |
| US-2023002436-A1 | Modified nucleotides and uses thereof | 2020-04-24 |
Applications of Fluorescent Probes & Dyes
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