DBCO-PEG3-Biotin

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DBCO-PEG3-Biotin

DBCO-PEG3-Biotin

Catalog Number R01-0291
Category Cycloalkyne Dyes (DBCO)
Molecular Formula C37H47N5O7S
Molecular Weight 705.32
Catalog Number Size Price Quantity
R01-0291 -- $--

Product Introduction

A biotinylation reagent containing a DBCO moiety for click chemistry

Chemical Information

Purity >95%
IUPAC Name 1-[5-methoxy-2-nitro-4-[4-oxo-4-[2-[2-[2-[2-[5-(2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl)pentanoylamino]ethoxy]ethoxy]ethoxy]ethylamino]butoxy]phenyl]ethyl N-[3-(2-azatricyclo[10.4.0.04,9]hexadeca-1(16),4,6,8,12,14-hexaen-10-yn-2-yl)-3-oxopropyl]carbamate
Canonical SMILES CC(C1=CC(=C(C=C1[N+](=O)[O-])OCCCC(=O)NCCOCCOCCOCCNC(=O)CCCCC2C3C(CS2)NC(=O)N3)OC)OC(=O)NCCC(=O)N4CC5=CC=CC=C5C#CC6=CC=CC=C64
InChI InChI=1S/C50H63N7O13S/c1-34(70-50(62)53-20-19-47(60)56-32-37-12-4-3-10-35(37)17-18-36-11-5-6-13-40(36)56)38-30-42(65-2)43(31-41(38)57(63)64)69-23-9-16-46(59)52-22-25-67-27-29-68-28-26-66-24-21-51-45(58)15-8-7-14-44-48-39(33-71-44)54-49(61)55-48/h3-6,10-13,30-31,34,39,44,48H,7-9,14-16,19-29,32-33H2,1-2H3,(H,51,58)(H,52,59)(H,53,62)(H2,54,55,61)
InChI Key QHTIWGZNJOYQBJ-UHFFFAOYSA-N
Solubility DCM, THF, acetonitrile, DMF and DMSO
Appearance Light yellow oil
  • Product Specification
  • Application
Storage -20 °C

DBCO-PEG3-Biotin, a versatile bioconjugation reagent widely utilized in chemical biology and medical research, boasts a myriad of applications. Here are four key applications:

Bioconjugation: Within the realm of bioconjugation, DBCO-PEG3-Biotin shines as a favored choice for labeling biomolecules like proteins, nucleic acids, and antibodies with biotin. Its azide-reactive DBCO group facilitates strain-promoted azide-alkyne cycloaddition (SPAAC) reactions, enabling precise and efficient labeling in various biological assays and studies. This capability for bioconjugation allows for specific and targeted labeling, enhancing the accuracy of biological analyses.

Purification of Biomolecules: One of the notable applications of DBCO-PEG3-Biotin lies in the purification of azide-modified molecules from complex mixtures. Following biotinylation, these molecules can be selectively captured using streptavidin-coated magnetic beads or columns. This purification method is particularly valuable for isolating specific proteins or nucleic acids from intricate cellular extracts, showcasing the reagent’s utility in streamlining molecular purification processes.

Immunoassays: DBCO-PEG3-Biotin plays a pivotal role in immunoassays, elevating detection sensitivity and specificity in diagnostic assays. By utilizing biotinylated antibodies or antigens immobilized on streptavidin-coated plates, the reagent facilitates the binding and detection of target molecules in samples. This application is essential in techniques like ELISA, enhancing the accuracy and efficiency of diagnostic testing through precise and targeted labeling strategies.

Cell Surface Labeling: In the dynamic field of cell biology, DBCO-PEG3-Biotin emerges as a crucial tool for labeling cell surface proteins with finesse. By reacting with azide-functionalized molecules on the cell surface, the reagent enables subsequent detection with streptavidin-conjugated fluorophores or other markers. This technique is indispensable for a myriad of applications, from studying cell signaling pathways to tracking cells in vivo and conducting flow cytometry analyses, showcasing the versatility and precision of DBCO-PEG3-Biotin in diverse cellular studies.

Computed Properties

XLogP3 3.2
Hydrogen Bond Donor Count 5
Hydrogen Bond Acceptor Count 14
Rotatable Bond Count 29
Exact Mass 1001.42045626 g/mol
Monoisotopic Mass 1001.42045626 g/mol
Topological Polar Surface Area 275Ų
Heavy Atom Count 71
Formal Charge 0
Complexity 1800
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 4
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 1
Compound Is Canonicalized Yes
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