Cyanine3.5 azide

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Cyanine3.5 azide

Cyanine3.5 azide

Catelog Number F02-0005
Category Cyanine3.5
Molecular Formula C44H53ClN6O
Molecular Weight 717.38
Catalog Number Size Price Quantity
F02-0005 -- $--

Product Introduction

Cyanine3.5 labeling reagent, solid material and 10 mM solution in DMSO, for Click Chemistry.Can replace Cy3.5®, Alexa Fluor 594, DyLight 594.

Chemical Information

Purity NMR 1H, HPLC-MS (95%)
IUPAC Name N-(3-azidopropyl)-6-[2-[3-(3-butyl-1,1-dimethylbenzo[e]indol-2-ylidene)prop-1-enyl]-1,1-dimethylbenzo[e]indol-3-ium-3-yl]hexanamide;chloride
Canonical SMILES CCCCN1C2=C(C3=CC=CC=C3C=C2)C(C1=CC=CC4=[N+](C5=C(C4(C)C)C6=CC=CC=C6C=C5)CCCCCC(=O)NCCCN=[N+]=[N-])(C)C.[Cl-]
InChI InChI=1S/C44H52N6O.ClH/c1-6-7-30-49-36-26-24-32-17-10-12-19-34(32)41(36)43(2,3)38(49)21-15-22-39-44(4,5)42-35-20-13-11-18-33(35)25-27-37(42)50(39)31-14-8-9-23-40(51)46-28-16-29-47-48-45;/h10-13,15,17-22,24-27H,6-9,14,16,23,28-31H2,1-5H3;1H
InChI Key XAQWULMJVUHJAN-UHFFFAOYSA-N
Solubility soluble in organic solvents (DMF, DMSO, dichloromethane), insoluble in water
Appearance dark purple powder / solution

Product Specification

ε, L⋅mol-1⋅cm-1 116000
Fluorescence Quantum Yield 0.35
Excitation 591
Emission 604
Storage 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

Hydrogen Bond Donor Count 1
Hydrogen Bond Acceptor Count 5
Rotatable Bond Count 15
Exact Mass 716.3969380 g/mol
Monoisotopic Mass 716.3969380 g/mol
Topological Polar Surface Area 49.7Ų
Heavy Atom Count 52
Formal Charge 0
Complexity 1340
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 2
Covalently-Bonded Unit Count 2
Compound Is Canonicalized Yes
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