BDP TR azide

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BDP TR azide

BDP TR azide

Catalog Number F01-0023
Category BODIPY
Molecular Formula C24H21N6BF2O2S
Molecular Weight 506.34
Catalog Number Size Price Quantity
F01-0023 -- $--

Product Introduction

This is an azide for copper catalyzed and copper free Click chemistry labeling with BDP TR, a bright red emitting fluorophore. BDP TR is an alternative to ROX and Texas Red. This fluorophore is based on borondipyrromethene scaffold, and contains aryl substituents to match its absorption and emission to ROX/Texas Red channel.ROX and Texas Red dyes are prone to oxidation, BDP TR is much more resilient to oxidants. Its brightness and photostability is also very high.

Chemical Information

Purity NMR 1H, HPLC-MS (95%)
IUPAC Name N-(3-azidopropyl)-2-[4-(2,2-difluoro-12-thiophen-2-yl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)phenoxy]acetamide
Canonical SMILES [B-]1(N2C(=CC=C2C3=CC=CS3)C=C4[N+]1=C(C=C4)C5=CC=C(C=C5)OCC(=O)NCCCN=[N+]=[N-])(F)F
InChI InChI=1S/C24H21BF2N6O2S/c26-25(27)32-18(15-19-7-11-22(33(19)25)23-3-1-14-36-23)6-10-21(32)17-4-8-20(9-5-17)35-16-24(34)29-12-2-13-30-31-28/h1,3-11,14-15H,2,12-13,16H2,(H,29,34)
InChI Key BRVIFVBXLZHAEK-UHFFFAOYSA-N
Solubility good in DMF, DMSO, DCM
Appearance dark colored solid
  • Product Specification
ε, L⋅mol-1⋅cm-1 69000
Fluorescence Quantum Yield 0.9
Excitation 589
Emission 616
Storage 24 months after receival at -20°C in the dark. Transportation: at room temperature for up to 3 weeks. Avoid prolonged exposure to light. Desiccate.

Computed Properties

Hydrogen Bond Donor Count 1
Hydrogen Bond Acceptor Count 8
Rotatable Bond Count 9
Exact Mass 506.1507816 g/mol
Monoisotopic Mass 506.1507816 g/mol
Topological Polar Surface Area 88.9Ų
Heavy Atom Count 36
Formal Charge 0
Complexity 993
Isotope Atom Count 0
Defined Atom Stereocenter Count 0
Undefined Atom Stereocenter Count 0
Defined Bond Stereocenter Count 0
Undefined Bond Stereocenter Count 0
Covalently-Bonded Unit Count 1
Compound Is Canonicalized Yes
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